Detailed information of Bpl_scaf_38338-6.20 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_38338-6.20SMADBpl_scaf_38338672136680499+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMH1

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03165MH1MH1 domainDomainInterproscan
PF03166MH2MH2 domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001132DomainSMAD domain, Dwarfin-typeInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR013790FamilyDwarfinInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13703SMADInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0030509Biological ProcessBMP signaling pathwayInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04676SMAD1; mothers against decapentaplegic homolog 1-TGF-beta signaling pathway ko04350PMID: 28812709
Hippo signaling pathway ko04390PMID: 28812709
Hippo signaling pathway -fly ko04391PMID: 28812709
Signaling pathways regulating pluripotency of stem cells ko04550PMID: 28812709
Transcriptional misregulation in cancers ko05202PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_38338-6.20 global RNA-seq network
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