Gene detail

Detailed information of Bpl_scaf_38273-0.6 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_38273-0.6	INHIBITOR OF APOPTOSIS	Bpl_scaf_38273	6192	11997	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_38273-0.6

AGAGCTGTCCCGATGGAAAATATATATTTACATTTGATGAACAGATGCAAAACAGAACTGTTGACATGAAAACACTAGTAACCATGGTAAATGGATCAAATAAATATGAGACCGAGCAAGAACTTAACACTCAGAATAAGAAATATTTCAAAACCGTTTCATGTTTCCATGGTACTGATCAAAAGATCATAGATTTATTAAGTAATGTGTTCACAAGCGTATACATGTTTTATCAGTTAGTATTACAAAGTTCAACGGAACGCAAACACAGTTTAACATGTGACCACCATTTACCACGTGATCAAAAAAGACCGATAACATCCAAGGAAATGCCAGGTAAGCATGGCTACTTGGACTTTTTGTTCGAATTACAGCGAATTCCGAATCAAATCATACGAGTTTTGCCTGTTAGTTTAAATTCTTATTTCGACAGCGTCACTTCCGGTAGTTCAATGTCGTTAAGCGAATCAATGTCAAATAATCTACTAAGAATTTCATCGTACAGTAATTTTCCCCGCCATGTCAACATATTTACAAGTTCGTTATCAAAAGCGGGGTTTTACTATACCGGAAACTTAGACGAGGTACGATGCTATGCATGTGGTATAACTCACCAAAACTGGAAGTCAGGTGATAATCCAATAGAAATTCATAGACGACTGTCTCCATCATGTTCTCACGTGAACAGTTTATGTGCAACAAGTGAACATTTTCAGGGATCTGCTAGTAATTTTCTACAAGTGACAGCTTCTTGTGCACCGTCTGCAACTTCAAATAACCAATCAACATCGTCAGTTCTGAAAGCTAATGGCACAATGAATTCAGATAATTCGACAAGTCATAATAGCATAAACCAGAATCTACCAGGAACTGGACAACTTGCGAACCTAAAAATGAACTCGTCCAATCCACATCCAAATATTAGCCCTCCAAACGAATACACAAATTCATCACATTCTCATCAGGACACTATTGCACAAAATGGTACTCCAAACCATTATCAAAACGGAGCTACTGGACATTGCGAAACATCTAATCACTGTACTGCTTCCGATCTTCTATCGATGGGTATTAACGTTGACAAACCGAGATACCCCAGATATGCATCTTTGCCGGTGAGAATCAGTTCCTATCAAGGATGGCCATCTTATTTAGACCAAACACCACGTGACATGGCTAAAGCTGGTTTCCTGTATGCTGGTTACCAAGATTATACTAGATGTTTCTTTTGTGGTGGAGGACTTCGGAACTGGGAGGCAGGAGATGATCCCTGGGTAGAACATGCCAGATGGTTCAAAACGTGTCCATATTTGATACAAAACAAGGGAGATAAATTTGTAAAAGCTGTGCAAGAAAAACAAAAGCAACTGGAAAAAGAAAAAAATCCAAGCAATTCCCACAATTCTTTGCTTGAATTACCATCAGCTTTACCAAACACCGACCCTCCTAATATTAACCCCAGAAGAAATCATCAAACAAACAAGCATCTTGACACTGTTGCAGCCAGAAGTGTCCTCGAGATGGGTTACTCTGACGACCAGGTTATCCAAGCCATCCAGCAAATAATGTCTTCAAATCCTGATGGAAGAACAATATCAGCAACTGACATAATGTCAGTTCTATTAGAAGAAAACAACGATGAAAATAGAGTAAGAGACATACCAGAATCTTCTGCAGCGACGGTTACTAGCGAAAATGGAATTTCTTCGTCATTTAACGGAGAAGAAAATGGAAGTTCTCCGTCATGCAACGGAACACAAAATGGAATTTGTTCGTCATTCAACGGAACACAAAATGGGAATGCAGAATTTTTGGTCGAGGAAAACAGACAGCTAAAGGATCAGCGATTGTGTAAAATATGCTTAGACTTCAACGCATCCATTGCATTTCTACCGTGCGGCCATCTTGTTTGTTGCTCTGACTGTGCACCAGCAATGAGGAAATGTCCGATATGTAGAGGACACGTGAAGGGCACCGTCAAAACATTCATGGTTTGAACTGTCATCAAATTTACTTACATTGGTCCAAATACGACAATTTTCATAGTATATTTGTACGTAAATCGAAGAAGGACAGACAATGCAATGGCCAAAAGAAAAAAGTACAAAAGGACAAAACACGAGATAAAGTACAGAAGGACAAAAAACGAGAAAAAGTACAAAAGGACAAACAACGAGAAACAGTACAAAAGGACAAACAACGAGAAACAGTACAAAAGGACAAACAACGAGAAACAGTACAAAAGGACAAAACACGAGAAAAAGTACAAAAGGACAAAACACGAGAAAAAGTACAAAAGGACAAACAACAAGAAAAAGTACAAAAGGACAAACAACGATCTACAAAACATACATATAAAGCTAAAGATATAGTAACACGAGCCCCACTAAAAACCGGAGATGAACTCAGGTGCCCCGGAAGGGTAAAAAGGTCAAAGATACCAATGGGGTAATCAGAGACCGTAAATAGAAGAAGGATGGATAATACAATGACCATAAGAAAAAGGACAACAGAACAACCACTGATCTACACATAAACGTTATAGAATACCGAAGGGGCAATCAAAAATGGACAAACCAGAGAAACTGGCAACATAGGGTACACAAGACGAAGAAAAAAAACCAACAACACAACACAATATGCATTGGACACCACTATGCGCAAACAAATACAAATATTAGTAACGTAAATAAGACATGAGCCCTCCTACAAACAACTGGAAGTAAAGACGAACCGAACATCATTTCTATGCTGAAATTGTAACGGACATCACAACACGGCACTCAGAAATTCAAGACACATACAAGAACGAAACACGGCAAAGAAAACTCGAACAACACAAAATACGAGGATGTGTGTATGTTTGAGGATTAAATGGGGGTGAATGACGATCAGGGTACTCAGAATATACAGCAGAAATTCCTTAAATGTTTTAGATAATTATGAACATTAACATTGTATAAAACATAAGCATTGTATAAAACATTAACATTGTATAAAAACATTAACATTGTATAAAACATCAACATTGTATAAAACATTAATATTGTGTAAAGCATTAACATTGTATAAAACTTTTACATTGTATAAAACATTAATATTGTATAAAACATTAGCATTGTATAAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00653	BIR	Inhibitor of Apoptosis domain	Domain	Interproscan
PF13920	zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001370	Repeat	BIR repeat	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR050784	Family	Inhibitor of Apoptosis	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10044	INHIBITOR OF APOPTOSIS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0031398	Biological Process	positive regulation of protein ubiquitination	Interproscan
GO:0043027	Molecular Function	cysteine-type endopeptidase inhibitor activity involved in apoptotic process	Interproscan
GO:0043066	Biological Process	negative regulation of apoptotic process	Interproscan
GO:0051726	Biological Process	regulation of cell cycle	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16060	BIRC2_3; baculoviral IAP repeat-containing protein 2/3	-	Ubiquitin mediated proteolysis	ko04120	PMID: 28812709
			NF-kappa B signaling pathway	ko04064	PMID: 28812709
			TNF signaling pathway	ko04668	PMID: 28812709
			Apoptosis	ko04210	PMID: 28812709
			Apoptosis - multiple species	ko04215	PMID: 28812709
			Necroptosis	ko04217	PMID: 28812709
			Focal adhesion	ko04510	PMID: 28812709
			Toll and Imd signaling pathway	ko04624	PMID: 28812709
			NOD-like receptor signaling pathway	ko04621	PMID: 28812709
			Pathways in cancer	ko05200	PMID: 28812709
			Small cell lung cancer	ko05222	PMID: 28812709
			Toxoplasmosis	ko05145	PMID: 28812709
			Platinum drug resistance	ko01524	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_38273-0.6 global RNA-seq network