Gene detail

Detailed information of Bpl_scaf_38107-2.11 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_38107-2.11	LOQUACIOUS, ISOFORM B	Bpl_scaf_38107	237815	241761	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_38107-2.11

ATGGAACCAGTTTATAATTTTGGAACAGCACCTATGTATACATATAGTACTGGTAGTAGTGGGACTGTAAAGCTCAAACAAGCTGGGAAATCAACAACAATGATAATGCCAACGGGTCCAGCCCCCATCATATCTAACAAACACCCAGTCATGCATCTGAATGAGCTAACTGAAGATTGTAAATATGAACTGGTTTCAGAGGACCAGGAAATGGATCCGAAAAACAAAAGAAAACGGTTGTACACCATGATGTTAACAGCTAATAATGAAAAATTTCAAGGAGTGGGACATAAAGCAAGCATGGGATCATTTGTGCCTGAAGGAACAACATTGGGAAAGAGGCCTAGCGTTGACGATGTACAAATGCCTGGTATACCAGGAAGTAAAAAGAAAAAGAAAAAAGAGGCTGCAGAAGGTCCAAGAAATCCTGTCATGAGGTTGAACGAGATTAGGTCCGGTCTTAATTATGTAGTAGAATCTACGACAGGTCCAGTCCATGCACCTGTGTTCGTGATGAGTCTTATAGTTGACGGCATGAAATACGAAGGATGTGGCAATTCTAAGAAAAAGGCTAAAATTGATGTGGCATTAAAGGCATTGAATGCCATAGAACCTGCCGCTGCTGAACAAACAATGCAATGTGAACCTTCTACAACCACGTAGGGGTCAGTGTCATTACACGTGGGAATAATATTTGATATCAGACTGATATCTAGTATTGGACTGATATTTAATATCGGACTGATAATATTTAGTATCAGAGTGATTGTAAATAAAAAAAATATGTGTAAATTTTACTACCATAAAAGATGGTATATGTTAGTTTTATTATTTTTCTACTGCCTATCTCAAGGAATTTGCTATAATTTTTATATGTAGCAGCCAGCTTGTTAAACTTGCCATGTGACATGATCTTGTGGATGGGGGGTCGATATTGACTTTAATAGTCATAGTTGAGGAATCTTGATGTTGTTGTGTGTTTTAGTAGTCATATTTCCATAATTCAATCAAAATCTCGACTTTTAAGTCTTTCTTGGTTTTCAAATTGAAACTCCTGTAACTCCCCTGGCCTACGGGACGTGTTCAACTTACCTTAAAATTATGTTATAGTAATTTTAACAGGGTATTTTAATGTCAAACAGGAATACTACGAAATACAGGTCTATTATGTATAATAAATTTTTTTTTTATTGTTTTTATTCTAGATTTTCACTGTTAAGATTGTATTTTTTATAGTAATAGATTTTTTGCACATTCCTGATTTGATTCTAAAATTATGCACTTTTATATCTTTTTATATATGAGTTATTTCCCTTACGACAGGCAAAATGGTACCTTGTCTAGGAAGAGCAATGGAAAGGAATATAAATTTGAGGATAATTTTATAGCCAATTAAAAACTCACAAGTTGATACAACATTAAAAATTTTGAACTGATTATGGAAAGAAATATGTTATTTAAATATTTTCATTGAACTTTACAACAAAAGGGGCCCTGTTTACCCACCTTAAAGGGAAATAACTCTTGTAACTCCTATAAGTATAGAATCAACATTGTAAATGTGCAAATGATCTAGTTGTCATTTAGAAATCATGAAAAATCTGTTAACAATTTCGAATTACATTTAGTCTAAAAAAATAATATTTGTAATTTTTTTTCAAATTAACGAAAAAATGGAATAAAAAGTAAATCTATAAATAGATGCAAGAAAAATGAGAATGTTTATTGAATTCATTATTATATAGATAATACAGGTTTTCAGTAGGGTTTGGTTTAGACAGGTTTTCAGTAGGTTTCAGTTTAGGCAGGTTTTCAGTAGCATTTGGTTTAGACAGGTTTTCAGTAGGGTTTGGTTTTAGACAGGTTTTCAGTAGGATTCAGTTTAGACAGGTTTTCAGTAGGGTTTGGTTTAGACAGGTTTTCAGTAGGGTTCGGTTTAGGCAGGTTTTCAGTAGGGTTCGGTATAGACAGGTTTTCAGTAGGGTTCAGTTTAGACAGATTTTCAGTACGGTTTGGTTTAGACAGGTTTTCAGTAGGGTTTGGTTTAGACAGGTTTTCAGTAGGGTTTGGTTTAGACAGGTTTTCAGTAGGGTTTAGTTTAGACAGGTTTTCAGTAGGGTTTGGTTTAGACAGGTTTTCAGTAGGGTTCGGTTTAGACAGGTTTTCAGTAGGGTTCGGTTTAAACAGGTTTTCAGTAGGGTTCGGTTTAGGCAGGTTTTCAGTAGGGTTCAGTTTAGACAGGTTTTCAGTAGGGTTCAGTTTAGACAGGTTTTCAGTAGGGCTTGGTTTAGACAGGTTTTCAGTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00035	dsrm	Double-stranded RNA binding motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014720	Domain	Double-stranded RNA-binding domain	Interproscan
IPR051247	Family	RISC Loading Complex Component	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46205	LOQUACIOUS, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003725	Molecular Function	double-stranded RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016442	Cellular Component	RISC complex	Interproscan
GO:0030422	Biological Process	siRNA processing	Interproscan
GO:0035197	Molecular Function	siRNA binding	Interproscan
GO:0070578	Cellular Component	RISC-loading complex	Interproscan
GO:0070920	Biological Process	regulation of regulatory ncRNA processing	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_38107-2.11 global RNA-seq network