Detailed information of Bpl_scaf_38080-7.11 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_38080-7.11PHD FINGER PROTEINSBpl_scaf_38080732411750786+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13831PHD_2PHD-fingerFamilyInterproscan
PF13832zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan
PF18104Tudor_2Jumonji domain-containing protein 2A Tudor domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR002999DomainTudor domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR040477DomainLysine-specific demethylase 4-like, Tudor domainInterproscan
IPR050701FamilyHistone Modification RegulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13793PHD FINGER PROTEINSInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06709KDM4, JMJD2, JHDM3; [histone H3]-trimethyl-L-lysine9/36 demethylaseEC:1.14.11.66
EC:1.14.11.69
Chromosome and associated proteinsko03036PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_38080-7.11 global RNA-seq network
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