Gene detail

Detailed information of Bpl_scaf_38078-2.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_38078-2.10	TUBULIN MONOGLYCYLASE TTLL3	Bpl_scaf_38078	183802	225463	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_38078-2.10

ATGGGGAAACACAAAAGGATAAAAAATGAAGCACTCGCCTTTATTCCGAAGATAAGCAAAACAAGCAGAAAATTAGCTTCGAGAAGATTGGAAAGCTTGGATACGGGAGGGGTACCACATTTTATGTTAAATACGAGAACGCACACAAGAGAACCGCTTGCCCCTATCCCAACTAGCCAGTCAGTAGGCCCAGATGAAAACAGAAGTGCACAATTAACTTCAAATGATTCAGTCAATGATTTTTCTATTGAACAAAAGGCATCATTTCAAAAAGAAAAACTATTCAAGGACAAAGTTGATTCAAAATCAAATCCAGAAACCTTTCGATCAAACATGTCTGGAAAAAATGATGTTAATTTAGATGACAACATTTTCACATTTAAACCCAAGGTCAGCAGTGCTAGTGCCAAGATTGTTGAAAATCTTGGTACCGACTTTATGGCTCGACAGCAACAGCATATTGAAAGACAAAGACGCAATTTAGAACAAGCTAATTCCATACCTGTATCATCATACACTGCTGGACGTCTTTCTCCAGTTAACAAATCAATCCGAAAGTCAAAGAAAAACAAGGAGAATGAAGAAGGTGAAAATGTTAACTCTACATCTGAAACAACTTTAGAAAATGAAACAGATAAAGCAAAAGAGGAAGAAACTGAAGGTGACAACAACATGCCCTTTATGTTGAATCATACTAAAACCACTGTTTCTCCTAACCTACAACGCATTCTTAATGGTCCGTATGCTGCAGGCAATCCTGACATGGTTCTAAAACGACATCGTAACAAGTTAACTAACCACCAGGTGAAAGCTAAACCAGTAGGAGACAGTGTAGATGGAGATACAGCAGATCTGGATCCTGAAGTTTCTGGTTCCCTGTCTAGAAGTAAAACCATGCCCACCTTAAGTCGACCAAAACTGACCAAAAAATTGGCTCATATAGATGGTAATGCTGAGCGTCTTCGCCATGCCAAAGAGGTAGCCGAAAAAGCAATGAAGAATCGAAAAGTATTTACCATTCAGGGTGGCTATTCGACTGTTCGACACAGTTTAAGGAAAAGAGGTTGGGTAGAAAAGTTTTACAAACTTCCGAGTCCACCAAAGAAAACTCCTAGAAAGAAACGTAAAAAGGGGGGTGGAGCAGATGATGCAGATGATATTGACGATGATGATGACGATGATGATGATGATGACGACGATGATGATGACGATGACAGTGATAATGATCAACCAAAAATTCCTCCCTGGGAAGAAGAAGATGGTATTTATGGAATAATGTCTCGTATTGTAAGAAACGTGAATCCAACATTTATTTGGGTGTTAAAACGAGATATCATAGACTACCGATTTTTGACAAAAGATCAGATGGTCAACCATTACTGTAAGGCAGGATCATTTACTACAAAGGTTGGACTGTGTGTAAATATGAGAAGCGTACCCTGGTTTGAAGATTCTGATCCCGATGCTTTTTATCCACGATGTTATAGACTTAGTCATGAAGAGGAGAAAGCTGCATTTATAGATGATTTCCGAGAAACAGCCTGTATAAATATATTGAAGTTAATTTCTAGTCAATACTCCCTTGGAAACTGTTTAGAAGAAATTAATAATAATGAAGAAAGCCCACAGGATGAGAAAGATCCTCCTTCAACCCCTAAGACAGAAGATTCGAAAGAAGAAACAGCAGAACCTAGTGTCATGTGTAGTAATCCAGAGTGCACACGTTCTAGACCTGGTAATAATTCTGGGAATGTGTGTCAACATGTTCAACCTCAACCACCAGTTGAAAAACCAAAAACTCCAGCAGTGCCAAGAATGCCTCCACAACCATCACTACCAAGGATACAGAATAAAAACAATAACAAGAAGAAACAAGTCACAGTGCCCATTACTTGTCTAGAACGTGCCATGGTACAGTGTAACTGGATTCTAATAGAAAAAGAACATGATGATATAGATCTATCAGGAACTTCAAAATATGAATTAACTCAGCATCAGTGGGATGAACTCTTGAAATGGTATTATCAACTTGCTCATGATGATGGTGTTATTCCCAATGTGTCACAAAGTATGCTCAATGAAGTGGAACAACTGCTGAATCGTATAAAAACAAAAAAATCTCAGTTTGAATTGGATGGAGTTAAAAATGTATGGATTGTAAAACCTGGTGCTAAATCAAGAGGAAGAGGAATAGTATGCTATCACAAGTTAGAAGATATGACAAAGTTAGTCAGTAGTCAGGTTGTAAGAAAGGACAATAAATATGTTGTACAGAAGTATATGGAGAGGCCTTTACTGATTTACAATACAAAGTTTGATATTCGCCAGTGGTTTTTAGTGACAGACTGGAACCCATTAACAATTTGGTTTTATCAGGACAGTTATTTAAGATTTTGTTCACAGCAGTATACACTGGACAATTTTGATGAATCTATACATCTATCTAACAATGCAATACAAAAACATTATAAGAATGGACCACGCAGTAGCAAACTGCCGTCTGATAATATGTGGACCCATGAACAGTTCAAAGACTACATCAAATCCAGAAAGTCTGGAAATATATGGGATGATATAATTTATCCTGGAATGAAGAATGCCATTGTTTGCTCTTTATTGTGTACTCAGGAAATTATAGAATACAGAAAGTCTTCGTTTGAATTATATGGTGCTGATTTCATGCTGACAGAAGATTACCGTCCATGGTTAATAGAGATCAATTCTAGTCCAAGCATGGAGAGTAGTACAGCCATTACATCAAGGCTGTGTAGTAGTGTGATGGAGGACACAATGAAAGTTGTTATAGACAGGAAGTTTGACAGGAATTGTGATATAGGAAGATTTGAGTTGGCATATAAACAGCCGGTGGTAACGGTTCCACCTTACATTGGCATGAGTCTGTCAGTGGAAGGACAGGCTATCCGTAAACCTAATTTTATAAGACGTGTTATTCCAGAAAGTAATAGTGAGCAAATTTCCACTAATACAAATAATACAAACAACACGCCACGTAAACAGCCATCAAATGCAGTAACATTTAACAAACGTCCTCAGAGTGAAATTGCTGATGGCAGTAATTACAAGCACCCGACTACCAACTCAGCTCCTGTCAAACTTGGTAAGTCTACAACTGAAAATCGTGTTCAATCAAAAGTCCAGTCTCAACAGAGCAAACCTATTATCAACAGTACAGAGAAATCCGGGAGCAGTGCACGACCAGAGAAATCATCCAGTTATACGATACGATCCAATAGTCATTCTGATGTTACCAGCCTAAGAACAAAAGGGCCTTCCCCAACTGTGCCAAAACCTGAAAAATCCAACGCAGTTCCTACTTCTAGTGCTATCTCCTATGCTGCTACCAGGATGGTTTCTAACACATCTTGTTCTACAAATTATTCCATTCCCCACTTATATGATACTAGGCCAAATTTGACCGTTAACAACGTCGAGTCGACTGATTTAAAGACAATCAAACCAGCATTGTCCTCGAGTCTTCTGGCATCTAAAGGTTTAAATCCCTTCATTGATGGTTCCTGGGCTAAGACATGTACCCAGTGTGGAGGTGGTATGAACTTACGGCTTGATAACATTGATCCTAACTGTAAATGTCGACAAGATAGTGTGTATTTTCCATCCAATCAATCTACTCATGGAAATGTTCGAGGTTTTCATCCTAAGAGGCCTAAAAGTAGTTATTCGCCTCGTCCAAAAAGTGGTACGACTGTTGGTGGACGGAATTCTGCTACTAATCTTACTGTTTCATCAACAAGAAACGATAAAACATTATTACGATATACAGACGGAGGAATTCAAAGACCTCATTCACCTTCATATATCGTTGGTGGAAACCCACTACCAAAAATTGTACGACGTTATATTGGTCGTCGAACTATGCCATGTCATAATGAGTTACGAGCTAGTTATACTTCTACTTCGTCTATATACATTGACACGTCTCAGATTCGTAACCCATTGTCTATTATTTCTCAAGGTTTTGGCAATAGATAA

Transcript

Bpl_scaf_38078-2.10

GGCGACCCATAGTTACGGAAGTTGTTAGACTGAAGTCGTATTTTCCTTCTTGATTTTGGGCCTGTCTGAGAGAAATGTTTATCAACTGCAATGGCAAGATGTACAGATGGGGAAACACAAAAGGATAAAAAATGAAGCACTCGCCTTTATTCCGAAGATAAGCAAAACAAGCAGAAAATTAGCTTCGAGAAGATTGGAAAGCTTGGATACGGGAGGGGTACCACATTTTATGTTAAATACGAGAACGCACACAAGAGAACCGCTTGCCCCTATCCCAACTAGCCAGTCAGTAGGCCCAGATGAAAACAGAAGTGCACAATTAACTTCAAATGATTCAGTCAATGATTTTTCTATTGAACAAAAGGCATCATTTCAAAAAGAAAAACTATTCAAGGACAAAGTTGATTCAAAATCAAATCCAGAAACCTTTCGATCAAACATGTCTGGAAAAAATGATGTTAATTTAGATGACAACATTTTCACATTTAAACCCAAGGTCAGCAGTGCTAGTGCCAAGATTGTTGAAAATCTTGGTACCGACTTTATGGCTCGACAGCAACAGCATATTGAAAGACAAAGACGCAATTTAGAACAAGCTAATTCCATACCTGTATCATCATACACTGCTGGACGTCTTTCTCCAGTTAACAAATCAATCCGAAAGTCAAAGAAAAACAAGGAGAATGAAGAAGGTGAAAATGTTAACTCTACATCTGAAACAACTTTAGAAAATGAAACAGATAAAGCAAAAGAGGAAGAAACTGAAGGTGACAACAACATGCCCTTTATGTTGAATCATACTAAAACCACTGTTTCTCCTAACCTACAACGCATTCTTAATGGTCCGTATGCTGCAGGCAATCCTGACATGGTTCTAAAACGACATCGTAACAAGTTAACTAACCACCAGGTGAAAGCTAAACCAGTAGGAGACAGTGTAGATGGAGATACAGCAGATCTGGATCCTGAAGTTTCTGGTTCCCTGTCTAGAAGTAAAACCATGCCCACCTTAAGTCGACCAAAACTGACCAAAAAATTGGCTCATATAGATGGTAATGCTGAGCGTCTTCGCCATGCCAAAGAGGTAGCCGAAAAAGCAATGAAGAATCGAAAAGTATTTACCATTCAGGGTGGCTATTCGACTGTTCGACACAGTTTAAGGAAAAGAGGTTGGGTAGAAAAGTTTTACAAACTTCCGAGTCCACCAAAGAAAACTCCTAGAAAGAAACGTAAAAAGGGGGGTGGAGCAGATGATGCAGATGATATTGACGATGATGATGACGATGATGATGATGATGACGACGATGATGATGACGATGACAGTGATAATGATCAACCAAAAATTCCTCCCTGGGAAGAAGAAGATGGTATTTATGGAATAATGTCTCGTATTGTAAGAAACGTGAATCCAACATTTATTTGGGTGTTAAAACGAGATATCATAGACTACCGATTTTTGACAAAAGATCAGATGGTCAACCATTACTGTAAGGCAGGATCATTTACTACAAAGGTTGGACTGTGTGTAAATATGAGAAGCGTACCCTGGTTTGAAGATTCTGATCCCGATGCTTTTTATCCACGATGTTATAGACTTAGTCATGAAGAGGAGAAAGCTGCATTTATAGATGATTTCCGAGAAACAGCCTGTATAAATATATTGAAGTTAATTTCTAGTCAATACTCCCTTGGAAACTGTTTAGAAGAAATTAATAATAATGAAGAAAGCCCACAGGATGAGAAAGATCCTCCTTCAACCCCTAAGACAGAAGATTCGAAAGAAGAAACAGCAGAACCTAGTGTCATGTGTAGTAATCCAGAGTGCACACGTTCTAGACCTGGTAATAATTCTGGGAATGTGTGTCAACATGTTCAACCTCAACCACCAGTTGAAAAACCAAAAACTCCAGCAGTGCCAAGAATGCCTCCACAACCATCACTACCAAGGATACAGAATAAAAACAATAACAAGAAGAAACAAGTCACAGTGCCCATTACTTGTCTAGAACGTGCCATGGTACAGTGTAACTGGATTCTAATAGAAAAAGAACATGATGATATAGATCTATCAGGAACTTCAAAATATGAATTAACTCAGCATCAGTGGGATGAACTCTTGAAATGGTATTATCAACTTGCTCATGATGATGGTGTTATTCCCAATGTGTCACAAAGTATGCTCAATGAAGTGGAACAACTGCTGAATCGTATAAAAACAAAAAAATCTCAGTTTGAATTGGATGGAGTTAAAAATGTATGGATTGTAAAACCTGGTGCTAAATCAAGAGGAAGAGGAATAGTATGCTATCACAAGTTAGAAGATATGACAAAGTTAGTCAGTAGTCAGGTTGTAAGAAAGGACAATAAATATGTTGTACAGAAGTATATGGAGAGGCCTTTACTGATTTACAATACAAAGTTTGATATTCGCCAGTGGTTTTTAGTGACAGACTGGAACCCATTAACAATTTGGTTTTATCAGGACAGTTATTTAAGATTTTGTTCACAGCAGTATACACTGGACAATTTTGATGAATCTATACATCTATCTAACAATGCAATACAAAAACATTATAAGAATGGACCACGCAGTAGCAAACTGCCGTCTGATAATATGTGGACCCATGAACAGTTCAAAGACTACATCAAATCCAGAAAGTCTGGAAATATATGGGATGATATAATTTATCCTGGAATGAAGAATGCCATTGTTTGCTCTTTATTGTGTACTCAGGAAATTATAGAATACAGAAAGTCTTCGTTTGAATTATATGGTGCTGATTTCATGCTGACAGAAGATTACCGTCCATGGTTAATAGAGATCAATTCTAGTCCAAGCATGGAGAGTAGTACAGCCATTACATCAAGGCTGTGTAGTAGTGTGATGGAGGACACAATGAAAGTTGTTATAGACAGGAAGTTTGACAGGAATTGTGATATAGGAAGATTTGAGTTGGCATATAAACAGCCGGTGGTAACGGTTCCACCTTACATTGGCATGAGTCTGTCAGTGGAAGGACAGGCTATCCGTAAACCTAATTTTATAAGACGTGTTATTCCAGAAAGTAATAGTGAGCAAATTTCCACTAATACAAATAATACAAACAACACGCCACGTAAACAGCCATCAAATGCAGTAACATTTAACAAACGTCCTCAGAGTGAAATTGCTGATGGCAGTAATTACAAGCACCCGACTACCAACTCAGCTCCTGTCAAACTTGGTAAGTCTACAACTGAAAATCGTGTTCAATCAAAAGTCCAGTCTCAACAGAGCAAACCTATTATCAACAGTACAGAGAAATCCGGGAGCAGTGCACGACCAGAGAAATCATCCAGTTATACGATACGATCCAATAGTCATTCTGATGTTACCAGCCTAAGAACAAAAGGGCCTTCCCCAACTGTGCCAAAACCTGAAAAATCCAACGCAGTTCCTACTTCTAGTGCTATCTCCTATGCTGCTACCAGGATGGTTTCTAACACATCTTGTTCTACAAATTATTCCATTCCCCACTTATATGATACTAGGCCAAATTTGACCGTTAACAACGTCGAGTCGACTGATTTAAAGACAATCAAACCAGCATTGTCCTCGAGTCTTCTGGCATCTAAAGGTTTAAATCCCTTCATTGATGGTTCCTGGGCTAAGACATGTACCCAGTGTGGAGGTGGTATGAACTTACGGCTTGATAACATTGATCCTAACTGTAAATGTCGACAAGATAGTGTGTATTTTCCATCCAATCAATCTACTCATGGAAATGTTCGAGGTTTTCATCCTAAGAGGCCTAAAAGTAGTTATTCGCCTCGTCCAAAAAGTGGTACGACTGTTGGTGGACGGAATTCTGCTACTAATCTTACTGTTTCATCAACAAGAAACGATAAAACATTATTACGATATACAGACGGAGGAATTCAAAGACCTCATTCACCTTCATATATCGTTGGTGGAAACCCACTACCAAAAATTGTACGACGTTATATTGGTCGTCGAACTATGCCATGTCATAATGAGTTACGAGCTAGTTATACTTCTACTTCGTCTATATACATTGACACGTCTCAGATTCGTAACCCATTGTCTATTATTTCTCAAGGTTTTGGCAATAGATAACACAGGTTACGAGTATGACGGTATTCTTCAAGTAAACCAAGGACTAAACATTTTTATATCCTAAAGTCAAGTTTTTGTTACTTGTCAACAAAATTTACATATAAATTTTAAACAAATCCTTAAACAGTGAAGTACATATTTGAAGCTTTTTAAAAATGGGAATTTGAAATCCCTTTGTGGTGGATTTGACTGTATTATATGCCACAAAGAATGGATTATTTTAGATAGTTAAAAATAACTTTGATATAGTTAAGAATTTCAAATTATTGAATTTATAATAATAGTAGGACAATATAATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004344	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR051437	Family	Tubulin tyrosine ligase-like monoglycylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45870	TUBULIN MONOGLYCYLASE TTLL3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003341	Biological Process	cilium movement	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005930	Cellular Component	axoneme	Interproscan
GO:0015630	Cellular Component	microtubule cytoskeleton	Interproscan
GO:0018094	Biological Process	protein polyglycylation	Interproscan
GO:0036211	Biological Process	protein modification process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0070736	Molecular Function	protein-glycine ligase activity, initiating	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16608	TTLL3_8; tubulin monoglycylase TTLL3/8	EC:6.3.2.-	Cilium and associated proteins	ko03037	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_38078-2.10 global RNA-seq network