Detailed information of Bpl_scaf_3782-4.19 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_3782-4.19SMALL NUCLEAR RIBONUCLEOPROTEIN EBpl_scaf_3782391263401896-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01423LSMLSM domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001163DomainSm domain, eukaryotic/archaea-typeInterproscan
IPR010920Homologous_superfamilyLSM domain superfamilyInterproscan
IPR027078FamilySmall nuclear ribonucleoprotein EInterproscan
IPR047575DomainSm domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11193SMALL NUCLEAR RIBONUCLEOPROTEIN EInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0005682Cellular ComponentU5 snRNPInterproscan
GO:0005685Cellular ComponentU1 snRNPInterproscan
GO:0005686Cellular ComponentU2 snRNPInterproscan
GO:0005687Cellular ComponentU4 snRNPInterproscan
GO:0034715Cellular ComponentpICln-Sm protein complexInterproscan
GO:0046540Cellular ComponentU4/U6 x U5 tri-snRNP complexInterproscan
GO:0071011Cellular Componentprecatalytic spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11097SNRPE, SME; small nuclear ribonucleoprotein E-Spliceosome ko03040PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_3782-4.19 global RNA-seq network
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