Gene detail

Detailed information of Bpl_scaf_37531-1.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_37531-1.10	EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT	Bpl_scaf_37531	132648	161577	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_37531-1.10

ATGGGAAGAGGACGTTCTCTAAGCACAAATGAAAGACAGTGGGCCGTTGGTATGCTGCAGGCAGGTCAATCTGCTCGACGAGTTGCAGAATTTATTGATGTTGGAAAGAAACAAAGAGCCCTAGATGCCTTATATGATGTCATCAAAAGTAAGAAACATCGAACATGGCAGAAAATACACGAACCCATTATGGAGAAATATCTCCAGCTGTGTGTGGAGTTACGTAAGAGTCACATAGCCAAAGAAGGTCTCTATCAATACAAGAACATATGCCAACAGGTGAACATAAAATCACTTGAAGATGTGGTGAGAAAATATATTAACTTGGCTGAGCAGAAAACTGAAGATGCCAGACAAGAATCACATCAGGTTGTTGTAGACATTGATGATTTGGACCAACCTGACACCCCAGAAAGTTTGTTACTTAAAGTTGTGAGTGGAGAAGACACACAGGATAGAACAGACAGAGCTATCTTAACACCATGGGTTAAATTTCTGTGGGAATCATACAGACAATGTCTTGATTTACTGAGAAATAATTCTAGGGTGGAACGACTGTATCAAGATATAGCACAACAAGCTTTTAAATTCTGCTTTAAATATGGAAGAAAAACAGAGTTTAGAAAACTATGTGATAATCTTAGAACACACTTGGGATTGGTTCATAAACATCAACACCAGCAGACTGCTATAAATCTAAACAACCCGGACTCACAGGCCATGCATCTGGAGACCCGTCTTGTACAGCTAGATAATGCCATTAACATGGAACTGTGGCAGGAAGCTTTCAAAGCAGTTGAGGACATCCATGGCTTGATAGGACTCTCTAAGAAACCAACAAAACCATCCTTAATGGCCAATTATTACCAAAAGTTAGGGCTGGTATTTTGGAAATCTGGAAACCAACTGTTCCATGCTTCCACTCTCCATAAAATGTTCCATTTGTCACGAGAACAAAGGAAGAATTTATCCCAGGAGGAATTACAGAAAATGGCATCAAGAGTGTTATGTGCAACATTAGCTATTCCTATTCCTGCTTCAAGAAATGCCATTGATCAGTTGTTAGAAAGTGACGAGCAGGCAGTAGATAAACAAAGACGTTTAGCTCAACTTTTGATGCTCCAAAATCCACCGAAAAGAACAGCTCTGATTAAAGATCTTGTGAAATACAATGTGATTCAATATGTTCATCCAGAGTTACAGAATTTGTATCAATATCTTGAGATGGAGTTCCATCCTCTGAAGCTACATGAAAAAGTCAAATCATCCATGGACTTCATCACTCAGAACGATGATCTAAACCAGTATCTTAATTCTCTAGAAGAAATTGTCATCACAAGAGTATTGAAACAGGTGTCACAAGTTTACCAGACCATTGAGTTTTCAAGACTTGCAGCTCTAGTACCATTTGCATCAAAATTTAGACTGGAAAGACTTGTTGTAGAATCTGCTCTAACACTTGAACTGCAGGTTAGGATAGACCACAGAAGTAAGTCGCTCAGTTTTGGTACAGATTTAATGGTGGCCCAGAAAGAAGATGTCCCTGAAGGTCCTTACATACAGAGTATGCCAAGTGAACAGATTAGAAATCAACTGACATCAATGTCCAGAGTGCTACATAAAGCTATAAAACTTGTTCAACCTGAGGATAGACAGTCTGTAAGAGATGAACTGAAAGTGAAAATAGCAAACAGCTACAGAATGACAGCTAAAAAAGATCAAGTGAACATCTTACAGAGAAGACACATCATTGAGGAGAGAAAAGAACAGTTAGAACACATGAATGATCAGAGGGAAAGGGAGGAAATGGAGCAACAAGAAGAGCAGAAGAAGAAAGCATATGATGCTGAAATGGCAAGACTTGAACGTGAAGCCAAGGAAAGAGAAAGGCAGAGGAAAGTAGAAGAACATAAAGAAATGCAGAAGAAACATGCACAAGAAAGAATTGAACAGTTGAGGAAGACTGAACTTGGAGCAAAGGTGTTACAAAATCTAGATGAAGAAGCTTTTGCTACACTAGATATTGAAGACATCATGGCAAAACAGGTTGAACAGTTAGAAAAAGAAAAGAAAGAATTGAATGAAAGACTGAAATCACAAGAGAAAAAGATTGACTTCCTTGCCAGAGCAAAAAGGCTTGAAGAAATTCCTGTTCTAAAAGAACAATATGATCAAGATCGTCAGGAGTTGAAGTTGTTCTGGGAGCAGCAGGAAGAGGAAAGG

Transcript

Bpl_scaf_37531-1.10

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01399	PCI	PCI domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000717	Domain	Proteasome component (PCI) domain	Interproscan
IPR027512	Family	Eukaryotic translation initiation factor 3 subunit A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14005	EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001732	Biological Process	formation of cytoplasmic translation initiation complex	Interproscan
GO:0002188	Biological Process	translation reinitiation	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005852	Cellular Component	eukaryotic translation initiation factor 3 complex	Interproscan
GO:0043614	Cellular Component	multi-eIF complex	Interproscan
GO:0071540	Cellular Component	eukaryotic translation initiation factor 3 complex, eIF3e	Interproscan
GO:0071541	Cellular Component	eukaryotic translation initiation factor 3 complex, eIF3m	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03254	EIF3A; translation initiation factor 3 subunit A	-	RNA transport	ko03013	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_37531-1.10 global RNA-seq network