Gene detail

Detailed information of Bpl_scaf_36697-0.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_36697-0.7	ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2	Bpl_scaf_36697	45633	87192	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_36697-0.7

ATGGATGACATTTTAAAAGAAGTGAAGGAACTGACGAAGACAGAACTCAGAAAAAAACTTATAGAAGTCGGCGAAAAAGTAGGACCTATTACCGCAACAACACAAGCACTGTTTCAGAAACGTTTAGCGAAACGTCTTTATGAAAATCAGCATCCAGACTTAACAACTGATGAAGCTCGGGACAATGATGTTGTAAATAACAACACTCTACTGAACAATGTTAAAGTTGAAGAAGTAGTTCATAAACCAACAGCAGAGGTTAATGATTCTGTAGAGGAGCCATCAATTTTCTATGATGAAGAATTGGTATATACAAACAAAGTGCAGGCCCTACAGGCTGTTAAAAAGGTTGCTGGAGCAAGATTTAAGGTTTTCCAATCAAGATCAGAAGCTAGACTGTTTAGCCAATCATCAGCAGATGCTCCCTGTCCATCTCCATGGAAATCAACATCTCAAAAGGCTACAGATAGCTTTATCTCCACACTAGGGACAGGGGTGTCTTTTGAAAGTTCTCCTTATAAGGCCCCTAAAGTCCAAGAGATTACAAAGTTCAGACTAGCTATTGAACAAGGAGACTGTGCTACGATAGAAACCATGGTGTGGGAAAATCCACGATTCCTAATCAGTAGTGCTGATACTCCATTGATAATACAGGAAGGTCCACGATACAACGCTTTACACATATCAGCCAAGACTAACCAGGCTCCTGTTGCCCAGCTGATCCTCGACATTTTAGAAGATCCCAGCTTTCTAGACAAGTTATATGGTCATACTAAAGAAACAGAGAGTACAAGGACAGATAGAATGAACTTTGTAGTTGACCTGTACCTCAACACTCCAGATAAAGGGTGTTGTGAATCACCACTTCATTTTGCCTGTAAGTTTGGATACACAGATGTTGTTTCTGTCCTGGCATCTCATCCAAAAGTTGACAAAAATCTGAAGAATAAGTATGGAGAAACTTCCAGAGATATAATATGTAGTAGATTAAAGACTCCCACACAGGACCAGAAAGCTGAGATTAAAGACCTACTAGAAGGTCAGTTTTATGTGCCATTGCTTAGAGCAGAAGATAATACAACACAACCCATGATTGGTCAGCCATGGTCACCTGACAGTTCAAATGTTCCTTTGAATGTTGCTGCTGGTTCCTGGTCCCCTAAAGATCCACTAATGGCTGTTAAGGCTTGTGCTGGTCCAATGACACCTTCTAAGGCATTCCATTTTCATAAACGATGGACAACGCCTCCATCTGGTAGTCCTGACCATGTGAAACGTAAATTTGTTTTTACCAAGAGAGAAGACATTGACAAGGGTGTAGAGAGAATTGGCAGAGAACTTGCGCATGAATATCAAATACCATGGGTGGAGTATTGGAATTTCTTACAGACTTATGCTGACTTGACAACAGAAGATGGATTAGATCTGTTTGAAGATTTCTTGCAGAGACAAAGTCTAGGGTTGTGTATTTCTGAAAAAATTGAGAAAATAGATTTGAAATATGATTCTGATGAGAGTTTTATAACAGCTAATCAGAGCAGTAATCCCATGAACTCATCATTTTTAAATTCCTCGTTATTCCAATCAATAAATGGATCACTGGGACATCAAAGTTTGAGTCCTCAGATTCTGGAGGAAGATAGTTTTTTGTGCAATGGACTAACGAAAACTAGCTCACCATTAAATACTTCTACGAACGAAATGGAGGAAAGTTTACATTTACCCAAGCATAATATTTATGATTATGGAAAAAATTACATGACATGGTCCATGGATAGTAGTGATTTTATGCAGGAAAGTTTCCATGCATCTGCTAGTCCTATGTCATGCTTGAGTGCTCTGTTTTCTAAACTTTCATTGTTAGACAGATCCATTAGACAGAAGAAAAGATCTGTGAGTTGTAGTTCATGTATGGGGGACCGTTCTGGACATAATTCTCACGAGAAGAATGTTTCTAAGCCATACAATTCTCCTCCAAGAGCAATGGAACCTATATCTGAAAACTCAGACAAGAGAGACATCAACAAAAACATTGAGGGAAGTGAAATAAAATCTGATTTATATTGTAATGGTAGCGTTCCAAATCGTGTGTGTGAAGATATTGCTGAAGAGAATTCTTCTGATGAAAATCCTGATAGGAGTCAGTCACCAGATGTCATTAGTGATAAAAACATTTCATCATGGAGAGATAATATCAGTATATCTTCATCATCGTCTTCCCTCAGTGAGGACAATAATTCTTCTTCAAGATCAGAGATCTATGATGGTGATGTGAAGATTATGTCTGAAGGGTCAACTGATCAAAATATTGAAAGTCAAAATATTATAGTTGATTCAAAATTTGCTTCTCAAGAAAAGAAAGATTTAAAAAATAACTGTTCAAATGTCATTTCAGATTTAAAGTTTGAATTGGGAGAAAATACATCTATAGAAAGTAAAGAGGATCCAAATACCTCTGTGAAAAGTAACGAAGGTCCAAATACCTCTGTGAAAAGTAACGATGTTTCAGATAAGGAGGGAACAAGTGTGGATTCTTTAAGTGGGAAATTTGAACAGGTTGTATCTGTGGATGAAGATACTGATTCTAGAATTAAAAGCCATTGTGAACCGACTCCTGAAAGAAAACGTAGAATTAGTTCTAAAGAAAAACCAGTATTTCTTCACCTCGACGTTGTATTTGAAATGAATAAGAACAAAACACCGGAAAATGTGTTTGAAGGTTTGTTTGAAGCTGTAAATGAACGACGGAAATCTAACATGAATTTGGACGAGATGGATTTTATGAAATATGGTGATGATGTTTGGAGTAGAGATTTTGTTATAGATTATGACTTGACACAGTCTGAACTGAAAGAAGGCTTAGAAATCTATGCCACGGTCGCTGTTGTCCCGTTAAACTTAAACTTACAGGAAATGAAAGTTTTTCCCAGAGTTCCTTTCAAACTGACTTCCTGTGAATACTTAAAAATAGATGACATTAATTTTTCTGAATCAACTGTGATTGTTAATGTTAAGTTTAATTTTGTTAAGGAACAGATGAAACAGGCTTTGTTGGTCAGCAATAGTTTCCAGATGAGAAGCTATTTTATCAATGGGCCTCTACCCACTAAGACAGATTTAGATGCCTTTAGAGCTATGGATGACTATGATATCAGTAGAACTGAATACCCCTACATACATAGATGGAGATCTTTAATATCAGCCAGGATAACAGACTGTGGAAATGATTGGCCGAGCCCTGCCAGAATACATCAGTATTCAAACCTGTCATCAAGTTTTCCACAGATTACAACACCAAGACTGAATGATAGCTCTGTATTGTTCCGTAGTCCACGGAGTCCTCTACAGAAGATGACAACAACATATACCTTACCTAATGTCAGGACCAAGCTCTTCAGTAGTGGATCAACTAAGGAATAG

Transcript

Bpl_scaf_36697-0.7

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF03020	LEM	LEM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR003887	Domain	LEM domain	Interproscan
IPR011015	Homologous_superfamily	LEM/LEM-like domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR051108	Family	DHHC palmitoyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12349	ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0035307	Biological Process	obsolete positive regulation of protein dephosphorylation	Interproscan
GO:0042326	Biological Process	negative regulation of phosphorylation	Interproscan
GO:0051721	Molecular Function	protein phosphatase 2A binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_36697-0.7 global RNA-seq network