| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_36629-1.4 | TRNA METHYLTRANSFERASE | Bpl_scaf_36629 | 179115 | 184683 | + |
| CDS | |||||
| Bpl_scaf_36629-1.4 | |||||
| Transcript |
| Bpl_scaf_36629-1.4 |
| Protein |
| Bpl_scaf_36629-1.4 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02475 | Met_10 | Met-10+ like-protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR030382 | Domain | SAM-dependent methyltransferase TRM5/TYW2-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23245 | TRNA METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008175 | Molecular Function | tRNA methyltransferase activity | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| GO:0031591 | Biological Process | wybutosine biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07055 | TRM12, TYW2; tRNA wybutosine-synthesizing protein 2 | EC:2.5.1.114 | Transfer RNA biogenesis | ko03016 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_36629-1.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
