Detailed information of Bpl_scaf_36585-5.4 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_36585-5.4UBIQUITIN-PROTEIN LIGASE E3CBpl_scaf_36585505192527514+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF16558AZULAmino-terminal Zinc-binding domain of ubiquitin ligase E3ADomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000569DomainHECT domainInterproscan
IPR032353DomainUbiquitin-protein ligase E3A, N-terminal zinc-binding domainInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR042556Homologous_superfamilyUbiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamilyInterproscan
IPR044611FamilyUbiquitin-protein ligase E3A/B/C-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45700UBIQUITIN-PROTEIN LIGASE E3CInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10587UBE3A, E6AP; ubiquitin-protein ligase E3 AEC:2.3.2.26
Ubiquitin mediated proteolysis ko04120PMID: 28812709
Viral carcinogenesis ko05203PMID: 28812709
Human papillomavirus infection ko05165PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_36585-5.4 global RNA-seq network
TOP