Detailed information of Bpl_scaf_36449-5.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_36449-5.5BECLIN 1Bpl_scaf_36449498831500150+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04111APG6Apg6 BARA domainDomainInterproscan
PF17675APG6_NApg6 coiled-coil regionCoiled-coilInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007243FamilyAtg6/BeclinInterproscan
IPR038274Homologous_superfamilyAtg6/Beclin C-terminal domain superfamilyInterproscan
IPR040455DomainAtg6, BARA domainInterproscan
IPR041691DomainAtg6/beclin, coiled-coil domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12768BECLIN 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000407Cellular Componentphagophore assembly siteInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0006995Biological Processcellular response to nitrogen starvationInterproscan
GO:0034271Cellular Componentphosphatidylinositol 3-kinase complex, class III, type IInterproscan
GO:0034272Cellular Componentphosphatidylinositol 3-kinase complex, class III, type IIInterproscan
GO:0045324Biological Processlate endosome to vacuole transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08334BECN, VPS30, ATG6; beclin-Apelin signaling pathway ko04371PMID: 28812709
Autophagy - animal ko04140PMID: 28812709
Autophagy - yeast ko04138PMID: 28812709
Autophagy - other eukaryotes ko04136PMID: 28812709
Mitophagy - animal ko04137PMID: 28812709
Apoptosis - multiple species ko04215PMID: 28812709
Kaposi's sarcoma-associated herpesvirus infection ko05167PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_36449-5.5 global RNA-seq network
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