Gene detail

Detailed information of Bpl_scaf_36437-3.7 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_36437-3.7	CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN	Bpl_scaf_36437	250295	303091	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_36437-3.7

ATGATATCACAAGAACTCAGGAAGTTATTTATTCCAGTGTTTTTAAACTGTTGGCTCGCCAAGTCAGCTTTACAAAATATGTTTAATGATCTTCATAGAGTGATGATGAAAGCACACTCAGCTCTTGCTCAACAATTAATGATTTTATGTGCCACAATTTTGTGCCTTGTTTTTACCAGCGTTTGTGGTATTCAGCACCTTCAAAGGGGAGGTAATCAACAGTTTAATATTATTGATTCTATTTGGTTCGTGGTTGTGACATTTTCTACAGTAGGGTACGGAGATATTTACCCTGATATTTGGGTTAGTCAACTGTATATGATCTGTATGATTGGAGCTGCACTCATAGTACTACCTACTCAGATAGAGAATCTAGGTTATACATGGTTAGAAAGACAGAAACAAGGTGGGGCCTACAGTAGCCATCGAGCACAGACAGAAAAACATGTGGTAGTCGTGGCTACGCTGTTACAGTCAGATACAATCTTAGATTTTCTACATGAATTTTACGCTCATCCAGCTCTCCAGAGCTTTTTTGTTGTCTTACTATCACCATGTGATTTAGATCCTACGATGAAGATGTTACTTCAGGCTCCTATCTGGTCACAAAGGGTTATCTATATTCAGGGATCGGCAGTTAAAGATACTGATCTAGCCAGGTGTAGGGTGCAGGATGCTGAAGCATGTTTTATTTTGGCTGCCAGGAATTATGCTGACAAAGCAGCTGCTGATCAACACACGATATTAAGATCTTGGGCCATTAAAGATTTTGCTCCAGACTGCCCTCAATATGTACAAATATTTAGACCAGAAAATAAGTTCCACGTCAAATTTGCAGAACATGTAGTGTGTGAAGATGAGTTTAAATATGCTTTACTTGCCAATAATTGTTTGTGTGCAGCAACCTCGACATTAGTCACACTACTTATACATACATCTAGGGGACAGGAGGGACAGGCCTCTTCAGAAGAATGGCAGCAGTTGTATGGAGAACGTTCAGGAAATGAAATATACAGCATTAAATTAGAGGACAGTACAAAGTTCTTCAAGGAATATGAGGGCAAAAGTTTTACATACGCTTCATTCCACGCTCATAGAAGGTTTGGTGTAAGCCTTATAGGCATACAACAGGAACTCCCAGATGCTACTATCCAGCTCAATCCTGGTCCGCGTCACATTATGAAAAAGTCAGATATTTGTTTTTATATGAATATAACCAAAGAAGAAAATACACAAACATTCCATGTGACACATTCAGTAGAGGACATGACAGCTAAAGGTGACACAGTCAGTATGCCTGACACGACGAAACATTTCTCCAGAATGGGTTCATCTGCAGGTAACACAGAGTCATCTTTAGAAAAATCCAGTACCAAACAATCATCCCAGTCATCTCCAGCGGACATTGCCCGTATACCAAGTAGACGACTTCATCTTGATCTTCCTAAAGGTTTAAATAGCCGTAATTTACAAAAACGTCCCAGTATAGCCCCAGTACCAGCCATGTTAGAAGCTAATGACATTCGTATACAACTCTGTAGTTCTGATCTGGAGTCAGATGAAGAGGACGACCTTGTGTTTGCTGATGATGATAAAGACGGGGATGGATATCCCGATTACATCAGAGGATTTCCACCAGTAACACCTTTCATTGGTACCAGTCCAACACTGTGTCATTTGATGAAAGAGAAGAGAGAATTCTGCTGTCTGAAGTTAAATACAACATGTGAACACTGTACCTATTGCTATGCTAACGAGTATAACTGGCCTAACAGGGCTATAATACTGACAGCTGACAACGCTAGTAATGGAATATATAACTTTATAGTACCTCTACGATCTCACGCCAGATCTAAATCATCGCTAAATCCTATTGTTTTACTTCTGGAGAAAGAACCTGAAGCAACATTCCTAGAAACTATCTGTCATTTTCCTATGGTTTACTGGATGAAGGGGTCTATAGAGTGCCTTGAAGATCTTCTTAAAGCTGGTATAAACTTAGCAGATAACGTCGTCATAGTAAATAAAGAGACATCCAATTCTAAAGAAGACGAATTCTTAGCTGACTGTAATACAATCGTAGCTGTTCAAACTATATTTAGATTGTTTCCTAGTGCCAATATTATAACAGAACTATCACAGTCCTCAAATATGAGGTTTATGCAGTTCAGACCTAATGATCAATACTCATTTACTCTTGCCAAACTAGAAAAGAAAGAGAAAGGTAGAGGATCTAACCTGTCTTACATGTTTAGGTTACCATTTGCTGCCGGTAATGTGTTCAGTGCCAGTATGTTAGATACCATATTATATCAGGCATTCGTGAAGCCATATGTAATCACATTCACAAGATTGTTATTAGGAATAGATCAAGCTGTTGGATCAGGACATTTAGCATGTATGAAGATAAAGAAGGAAGATCTATGGATTAGAACGTATGGTAGATTATATCAGAAGTTTTGTTCTACAACATGTGAAATACCTATAGCTATATACAGAACACAGTTACAAAGTAGTGGAGAAAAAACACCTAACTCAACATTCGCAGGCCGTGATCAGTCTGCACTCAACTTAGCATTTAGAAACTCAGTTAAAAGAAGAAGACCAGATCCAACGAAGTCACATCCAGAAGTGTCGTTAAGTCTGATTGGTTTAGACAGTGACGAGGAGGAAGGGAGATGTCACATGACCCCAGAGAGACATGAGATTTGTCAGATGGTACGCTGTCGTATGCAAAGTCTTAAACAACCTCTTAGTGATTATGATGCAGCCAGTGATAAAAGGAATACTATATCTTACGTGATAATTAACCCAAGTTATGACCTACGATTGAAGGAGGATGACATTATATACCTTGTAAAACCAAGTTCATTATCACCGCAACCATCTCCATTAATTGACGAGAGGAAAAAGATGCAGTCACAACCGAGGGAGGAACCGACAGGGGCAGATAACTCTGATATAGAAGCTACGACAAGTCATTTAATGAAGAAGGACAGTAGATCAGAAGACGTTGGCGTTGATACACCATCAAATGGTTCTCTGCCAGGCAACAATAATATCCCTATAGTGTTTGTAGATGATAGTGATGAAGATGAGACGCATTCGCCTGCCTCACAACAACCAAGATTTCATCTAGGCAACAAGCGACACATTCCATCGAAAATAAAAACCTTCCGAAACAGACAAAAGGGATCCGTACCAGATCTGTATACTGATCACAATGAATTCCATAAAGAGCCTCTTACAAGTAAAAAGTCGGCACCCGAATTACGAGGAGGAGGACTTAAAGGAACAGTTGTGTGA

Transcript

Bpl_scaf_36437-3.7

TTTTCTTTTTTTATTTTATATTTTGAATGTTTTGATGTTGTTTACTTTCAGATGATATCACAAGAACTCAGGAAGTTATTTATTCCAGTGTTTTTAAACTGTTGGCTCGCCAAGTCAGCTTTACAAAATATGTTTAATGATCTTCATAGAGTGATGATGAAAGCACACTCAGCTCTTGCTCAACAATTAATGATTTTATGTGCCACAATTTTGTGCCTTGTTTTTACCAGCGTTTGTGGTATTCAGCACCTTCAAAGGGGAGGTAATCAACAGTTTAATATTATTGATTCTATTTGGTTCGTGGTTGTGACATTTTCTACAGTAGGGTACGGAGATATTTACCCTGATATTTGGGTTAGTCAACTGTATATGATCTGTATGATTGGAGCTGCACTCATAGTACTACCTACTCAGATAGAGAATCTAGGTTATACATGGTTAGAAAGACAGAAACAAGGTGGGGCCTACAGTAGCCATCGAGCACAGACAGAAAAACATGTGGTAGTCGTGGCTACGCTGTTACAGTCAGATACAATCTTAGATTTTCTACATGAATTTTACGCTCATCCAGCTCTCCAGAGCTTTTTTGTTGTCTTACTATCACCATGTGATTTAGATCCTACGATGAAGATGTTACTTCAGGCTCCTATCTGGTCACAAAGGGTTATCTATATTCAGGGATCGGCAGTTAAAGATACTGATCTAGCCAGGTGTAGGGTGCAGGATGCTGAAGCATGTTTTATTTTGGCTGCCAGGAATTATGCTGACAAAGCAGCTGCTGATCAACACACGATATTAAGATCTTGGGCCATTAAAGATTTTGCTCCAGACTGCCCTCAATATGTACAAATATTTAGACCAGAAAATAAGTTCCACGTCAAATTTGCAGAACATGTAGTGTGTGAAGATGAGTTTAAATATGCTTTACTTGCCAATAATTGTTTGTGTGCAGCAACCTCGACATTAGTCACACTACTTATACATACATCTAGGGGACAGGAGGGACAGGCCTCTTCAGAAGAATGGCAGCAGTTGTATGGAGAACGTTCAGGAAATGAAATATACAGCATTAAATTAGAGGACAGTACAAAGTTCTTCAAGGAATATGAGGGCAAAAGTTTTACATACGCTTCATTCCACGCTCATAGAAGGTTTGGTGTAAGCCTTATAGGCATACAACAGGAACTCCCAGATGCTACTATCCAGCTCAATCCTGGTCCGCGTCACATTATGAAAAAGTCAGATATTTGTTTTTATATGAATATAACCAAAGAAGAAAATACACAAACATTCCATGTGACACATTCAGTAGAGGACATGACAGCTAAAGGTGACACAGTCAGTATGCCTGACACGACGAAACATTTCTCCAGAATGGGTTCATCTGCAGGTAACACAGAGTCATCTTTAGAAAAATCCAGTACCAAACAATCATCCCAGTCATCTCCAGCGGACATTGCCCGTATACCAAGTAGACGACTTCATCTTGATCTTCCTAAAGGTTTAAATAGCCGTAATTTACAAAAACGTCCCAGTATAGCCCCAGTACCAGCCATGTTAGAAGCTAATGACATTCGTATACAACTCTGTAGTTCTGATCTGGAGTCAGATGAAGAGGACGACCTTGTGTTTGCTGATGATGATAAAGACGGGGATGGATATCCCGATTACATCAGAGGATTTCCACCAGTAACACCTTTCATTGGTACCAGTCCAACACTGTGTCATTTGATGAAAGAGAAGAGAGAATTCTGCTGTCTGAAGTTAAATACAACATGTGAACACTGTACCTATTGCTATGCTAACGAGTATAACTGGCCTAACAGGGCTATAATACTGACAGCTGACAACGCTAGTAATGGAATATATAACTTTATAGTACCTCTACGATCTCACGCCAGATCTAAATCATCGCTAAATCCTATTGTTTTACTTCTGGAGAAAGAACCTGAAGCAACATTCCTAGAAACTATCTGTCATTTTCCTATGGTTTACTGGATGAAGGGGTCTATAGAGTGCCTTGAAGATCTTCTTAAAGCTGGTATAAACTTAGCAGATAACGTCGTCATAGTAAATAAAGAGACATCCAATTCTAAAGAAGACGAATTCTTAGCTGACTGTAATACAATCGTAGCTGTTCAAACTATATTTAGATTGTTTCCTAGTGCCAATATTATAACAGAACTATCACAGTCCTCAAATATGAGGTTTATGCAGTTCAGACCTAATGATCAATACTCATTTACTCTTGCCAAACTAGAAAAGAAAGAGAAAGGTAGAGGATCTAACCTGTCTTACATGTTTAGGTTACCATTTGCTGCCGGTAATGTGTTCAGTGCCAGTATGTTAGATACCATATTATATCAGGCATTCGTGAAGCCATATGTAATCACATTCACAAGATTGTTATTAGGAATAGATCAAGCTGTTGGATCAGGACATTTAGCATGTATGAAGATAAAGAAGGAAGATCTATGGATTAGAACGTATGGTAGATTATATCAGAAGTTTTGTTCTACAACATGTGAAATACCTATAGCTATATACAGAACACAGTTACAAAGTAGTGGAGAAAAAACACCTAACTCAACATTCGCAGGCCGTGATCAGTCTGCACTCAACTTAGCATTTAGAAACTCAGTTAAAAGAAGAAGACCAGATCCAACGAAGTCACATCCAGAAGTGTCGTTAAGTCTGATTGGTTTAGACAGTGACGAGGAGGAAGGGAGATGTCACATGACCCCAGAGAGACATGAGATTTGTCAGATGGTACGCTGTCGTATGCAAAGTCTTAAACAACCTCTTAGTGATTATGATGCAGCCAGTGATAAAAGGAATACTATATCTTACGTGATAATTAACCCAAGTTATGACCTACGATTGAAGGAGGATGACATTATATACCTTGTAAAACCAAGTTCATTATCACCGCAACCATCTCCATTAATTGACGAGAGGAAAAAGATGCAGTCACAACCGAGGGAGGAACCGACAGGGGCAGATAACTCTGATATAGAAGCTACGACAAGTCATTTAATGAAGAAGGACAGTAGATCAGAAGACGTTGGCGTTGATACACCATCAAATGGTTCTCTGCCAGGCAACAATAATATCCCTATAGTGTTTGTAGATGATAGTGATGAAGATGAGACGCATTCGCCTGCCTCACAACAACCAAGATTTCATCTAGGCAACAAGCGACACATTCCATCGAAAATAAAAACCTTCCGAAACAGACAAAAGGGATCCGTACCAGATCTGTATACTGATCACAATGAATTCCATAAAGAGCCTCTTACAAGTAAAAAGTCGGCACCCGAATTACGAGGAGGAGGACTTAAAGGAACAGTTGTGTGAAAATACCGTCCTTTTGTGTTTAGGCAATTATGAGTCACAAGTTACAGATCGTCAATTAGCTTTTCAGCTGTAATTTGAAACCTTCCCAGAATTCAGTAGTCATATGGAGGATATATGACAGATGAAATATACCGTAAGATGGACGAAGTGAAAATGTAGGAAAATTTTCTTGTTTAATGTTGACAGATACATGTAGATGGAAAAAAGTGGGCATTTGAAAAATCGACATGCAAGCATGTTAAACACGAAGAAAAACAAGAGTTCAAATATTCATTTGTTAGATGATATATATCTACACATACAATTATGGAGAGAAATTATGCAAGATATACGTATGAATCTAAGTAATTATGTGAAGCCGAAGGGAATTTTAAAAGGATCAAAAATTCATTTTTGCATCTTAGAAAAGATTTAAAGTGAAAATATTTGTTATCGTTGTGATTTGGATGCATACAAAACATTTAACAATTTTGTGAAGTAGCAACAAAGATAGTTTTTGCTTCTTTTTTTTTCCTCTTATTTTTAGTAGAGGTGAAATTTTAGTATCTGTTGGCATCCGTATGTCGTCTGCTGTCATTAATTTTTTCACATTTTAAGCTTCTTTGGCAAAACTGCTTAACCAAATGAAACCAAACTTAGCAAGGATTATCAATAGGAAGAGTAGATTCAGCTTTATATAAATGAAATTTGAAATTGATCCTCCATGAGGAGGAGGAGTTAGTAAGGGGGCATAAAAGTGGGAAATACAAAAAAAATTTAATCTTTTCAACATCCAGAATTAGCAATGCTGCATTTTTTTTTGTTCAGCATTGTTGTTGATTTAGATGTGTCCAAAGGTCCACTGGTCAAAAAGTCCGAACTTTTGTGTGTTAAGTTTTGCATGGGCTCAATGAGAAAGATTAAATAAAATTCTTTCGAACTAGTAATAGAATTGTAATTTTGCACCTATAAAGGTCATGTGGTCTATTGAGTATAAGTCGTTGGACATCAATATTAAACAAATACTATGATAGACAATAAGATATTCTTAACCAGGTCAGCGACAAAAGCTTATGTGAACCTCTTGTTTTCTTTGTTTTGTTTTTTATATATCTATAGCTGGTAGTCTATTATTTGCTAATACATGTACG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03493	BK_channel_a	Calcium-activated BK potassium channel alpha subunit	Family	Interproscan
PF07885	Ion_trans_2	Ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003929	Domain	Calcium-activated potassium channel BK, alpha subunit	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR047871	Family	Calcium-activated potassium channel slowpoke-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10027	CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005228	Molecular Function	intracellular sodium-activated potassium channel activity	Interproscan
GO:0005267	Molecular Function	potassium channel activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006813	Biological Process	potassium ion transport	Interproscan
GO:0015271	Molecular Function	outward rectifier potassium channel activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0071805	Biological Process	potassium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04946	KCNT1, KNA1.1; potassium channel subfamily T member 1	-	Ion channels	ko04040	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_36437-3.7 global RNA-seq network