Detailed information of Bpl_scaf_36437-0.14 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_36437-0.14ATP-DEPENDENT RNA HELICASE DBP3Bpl_scaf_364372349533513+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014014DomainRNA helicase, DEAD-box type, Q motifInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47958ATP-DEPENDENT RNA HELICASE DBP3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12812UAP56, BAT1, SUB2; ATP-dependent RNA helicase UAP56/SUB2EC:3.6.4.13
Spliceosome ko03040PMID: 28812709
RNA transport ko03013PMID: 28812709
mRNA surveillance pathway ko03015PMID: 28812709
Influenza A ko05164PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_36437-0.14 global RNA-seq network
TOP