| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3643-6.5 | TUBULIN | Bpl_scaf_3643 | 625599 | 628904 | + |
| CDS | |||||
| Bpl_scaf_3643-6.5 | |||||
| Transcript |
| Bpl_scaf_3643-6.5 |
| Protein |
| Bpl_scaf_3643-6.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00091 | Tubulin | Tubulin/FtsZ family, GTPase domain | Domain | Interproscan |
| PF03953 | Tubulin_C | Tubulin C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000217 | Family | Tubulin | Interproscan |
| IPR002452 | Family | Alpha tubulin | Interproscan |
| IPR003008 | Domain | Tubulin/FtsZ, GTPase domain | Interproscan |
| IPR008280 | Homologous_superfamily | Tubulin/FtsZ, C-terminal | Interproscan |
| IPR017975 | Conserved_site | Tubulin, conserved site | Interproscan |
| IPR018316 | Domain | Tubulin/FtsZ, 2-layer sandwich domain | Interproscan |
| IPR023123 | Homologous_superfamily | Tubulin, C-terminal | Interproscan |
| IPR036525 | Homologous_superfamily | Tubulin/FtsZ, GTPase domain superfamily | Interproscan |
| IPR037103 | Homologous_superfamily | Tubulin/FtsZ-like, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11588 | TUBULIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000226 | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0000278 | Biological Process | mitotic cell cycle | Interproscan |
| GO:0005200 | Molecular Function | structural constituent of cytoskeleton | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005874 | Cellular Component | microtubule | Interproscan |
| GO:0007017 | Biological Process | microtubule-based process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07374 | TUBA; tubulin alpha | - | Phagosome | ko04145 | PMID: 28812709 |
| Apoptosis | ko04210 | PMID: 28812709 | |||
| Tight junction | ko04530 | PMID: 28812709 | |||
| Gap junction | ko04540 | PMID: 28812709 | |||
| Pathogenic Escherichia coli infection | ko05130 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_3643-6.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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