Gene detail

Detailed information of Bpl_scaf_36180-1.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_36180-1.8	GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT	Bpl_scaf_36180	154202	165334	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_36180-1.8

CCCCGATTCAACACAACACAAACCAGTTTCGTGGTTACAGAATGGCAGAAGAATCAACAGTTACTCCTCCGGTCATCCCTAAAGTTGGTTCTATAGTTGTACACACAGGGAATATTGTCTGCTGGAATAGACTGAAAAAGAAAGCAAATGAAACACCAACTGCAGAGATAACAGAGAGTGTTGGTGCAACCTTCAGAGCTATCATAGATGCTACAGACAAAAATGAGTTACAGTATCAAACAGAACTGACGTGTAACAATTCTAAGTTTATAGAAACATTACCTGAAGATGAAAGGGGTGATCTGAAACTCACAGTTAAAATATTTTTATGCAGTCTACTGCCAGCAGAATCCTTGAAAGAAGCAACAAGCAAAGCCCTAAAAGAACTGAATGTGACCTTCATAGAGACAGTACTGTTAGCTTTCCCAGAATTTGATGAAGATGATGAGCTGACCTTAGATTTGATCAAACCGTATTGGACTTGTCTGGAGCAACTAGTCGATAGGGAAATCGTTCTGTCTGTTGGAATAGCAGACCTTAACAAAACTTTACTGGAAGAATTGTATAACTGGTCAAGGGTAAAACCATGTATAAATCAAGTGAATTTAGAATCATGCTGTGTGATGCCTAAAGACTTAACAGAGTATGCTAAAGAAAATGATATACAACTGTTAACACACAATGACCCAAGAGATATCCTACCAACAAAATCATTCCAAGAATTAATATCATCCAATACAACAGAAAAGGATGGGGAAGGATGGGATCCTTTATGGGTCCTCAGATATTCTGTCCTTGTTAAATGTAGGGGAATCATCAAGACAAAGGGCTATATTCTAAAAGGTTACAGAGATACGAAAAAAAGGAAATAAAATGATCAGTCAGTACCGATAAAAAGATCGACCAAATCTGAAATCTGAAAATTGTTGTACATTTAAAAAAAAAATTAAGTAGAAAGTGCATGTGAAAGAAACACAAATTATACTTGATATCTGTGATTTTGTATCAAAATATTCACATTTTTAGAATGAGTCACATTTAGAGAATGATTCACATTTCTTATGCTTTTGAATTCTCATTGGTAAATTTTTTTTTCACATTGATGGAATTTTATTCATAATTTGGGGTATGACACAGTGTTCACATAGCTTGACCTTTCTTCATCATTTGGTGTCTGACAAAGTGTTAACCATGGCTTGAGCTTTATTCATCATTTGGCATCTGACATCTGTTCAAAACCTTCTCCACATTTCAATCTGATTCTCAGAAACCACAGAGCCATTTCAACCAAAATTTGGTTGGTTTGAAATTCTCTAAAAGAAAGGACTGACATTTAATTCTTACATTCTGACGACAATTTTTTTCAAAAGTCTATGTTCATTTTAGACACGAACTAGCCTTTTTTCAGATATTCAATTCCAAGAGGGGGTGTGCATTATGCAACCCTTATGATGGTATTTTAATCTAATTGATCCAAAGTTATTGAATATTGTGACATTTTGATGTCATGGACAAATAACATATAGAAACAAATTAAATTCTTTTTACTTCTATCAAATACTGACTGCCTTCAACAAGTTGGAGGTTGTGTACATATATATTGTCCATTAAATTAATATATGTTCTAGTATTCTACGACAGTCTTAAATTTGGACGCAATAAGTGTTGTTATCATACCCCTATTTGCAGAAAGGTAACTCTTATTGTCTTATTTTTTTGCGACCATAAAGCTACGGATCTTGCCTGTTAAAAGCTTGCGATATATAGGGACCTAACCTTAAGTCGCAATTTTGGTTAGCAATTGCAATGTGTAAGATAAGTTTTATTTAAAGTCAGCTTTTCAAAACAACAAATACAGTACAAGCTCAACAAGCTCTATTCAGCTTTTAACCGATATGTGTGGCACTTGGCCTGAGTTGTATAAAAGTTAGAAAGTGTTTAGTGAAATATTTTTCTACAATATACAAGAGTTAGTTCCCTTTGAATATTTATATTAACATCCTTATATGGGATAAATGTCTCAGTCTATTGTTCTTATCTTTTTTTTTGGTGACCATAGAGTTATGGATCTTGCTGGTTGAAAAACCTGTGATATAGTGAACTAAAACTATGTTTCTGCAGCTAATTATACCCCCTACGTACTTTATTTATTTTACTTAGTTTGCGATAATAGTGTAGTCAGTCATGTAACATACTCAGACTTTTACTTAGTTATGTGATGGACCGAGGCAAGTATTATCTACAAGTAATAAGTAAGGTGACACATTTTTATCAATGAATTGTACATTTTCTCTTTGATCTTTATATGCTATAATATCTGATTGCAAGCGACAAGCGCGATCGAGACATATTTATCGTTGATTTCTAACATTGACGTTATATTGATGTAATTTTTGACAAATCCTTGATATACTATCGTTGTTTTTTTTGCATCGAGAGGGACTTCTCATGGTATCACACATCAAGGCGATATTGAGTTAAGAAATCCATTCTCACAAAACAAATATCAACGATGGTATATATTTATACTAGACTGAATAATCTGTCTCTTGTGTCTTTATATTTGTCATATATTTCCTTTTTGTTATTTGGACATTTATTGTTTAAAAAAAAAAATAATAATAAATAAATAAATGTCCAAATAATAAAAAGGAAATATATAATGACAAATATAAAACACACAAGAGACAGATTATTCGGTCTATATTTATACATGTATTGCTATCAGTTTTTGAAAGAGCCATAAGAGGGCCAGGGTGCATATTGTACATCAATGGGTATAATACACAATCTGTTACTCCCTTGTCGTATATTTATTTTTCTTATTTGCGCTGGTGCTATTCTTGTAGATTTTTTTTTGTAATGTAATGATTTTCTTTAATAAATTTATATAATATACATTGTACATGTAGTGGACAGTGCCGTCTTAACGCATGGGCATGCTGGGCAGTTGCCTGGGGGCCCCACTAGCATTTGGGCCATGCTAATCTATGTATGTTGTGTACTGCATGTTTTTTTTTAATGTTTCAACTGATTTTGTTGGAAGTACCAATACAATAAATATATGTTTAATTTTAGTAAATTAATAAACCAAAATGAAAAACAAAAGAACATATTAGTTTCCTAAAATGATTTTTTTATTAATACGATGCAATGTGTATAGCATCATCATGCTTCGATACTTTCCACTCATCACCTGTGGGTCATGAATTATTCATGAGTCATTTTAACACATTTTGATTAGTTACAACACAATGTTTTACAGCCAATCACAGTTTTTGAAAAAAAAAAGAAAAAAAAAAGCATGCTTTCATTGCAAATTAATATGATATGAGGGGAGGAACAGTACTCTTGGTTTGGCCATAAAATCATTTGGCCAGTCTAGGTGAGTATTATATATAAGAAATCAATTCAATTATATTACAATTAATTATTGAAAGGATGAATATTATATATAGATGTGTACACATTACCAATTACTGTACAAATGTTTTATGTGTTGAAACAGATTCCTATTTTGAAAAAAAAATTCTATATGAAATTGCAGAAAAATCATGTAAAGCAGTTTGTTTATTACTGAAATTAACAACAATCATTAGTGTTGAAATTTAATGGATTTGATATGTTATATCGCCATGGCAACACTTCTCTGCGCTTTTTCCCCAATAAGAAATTTTGTTATACCGGTAATACACATAATTTTATATTTATGTTATTTTTTCATTGTGGCTTCATTTTATATATTGATACCAAAGTTTTATCACCCGGTCTGTATTTATTAAAGCGACTTTAACTTTGCTAATGGAACAATTTTTTTTTACAAAATTGAACTTAAATATCCCTTTAAACACGAAATTTTTTTAATCAGTNNNNNNNNNGTTTTTTTTTTTTTTAATAAAAATGTGCACCTGTAATAAATTACGCATATTAGCTGTAATTTTGCTTTAAAATGAGCAAAAATCATAAAATATTATTAGTGTAGAAATTAATTGCAAGTGGTGATGTTTTTTTATGGGATACACTGTGTTGAAAAAATCTTATCTCAAGAGATAGAAATAGAAAACCAAAAATCCCACTTTGCATAGAATTAGTATTGCTGCCTGACAAGGCTCAATAAATTAATTAATTTTACAATATTTAGGGTATTTATATTATATTCCTTGTAATGTATTTAAGTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00248	Aldo_ket_red	Aldo/keto reductase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023210	Domain	NADP-dependent oxidoreductase domain	Interproscan
IPR032963	Family	Glutamate--cysteine ligase regulatory subunit	Interproscan
IPR036812	Homologous_superfamily	NADP-dependent oxidoreductase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13295	GLUTAMATE CYSTEINE LIGASE REGULATORY SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006750	Biological Process	glutathione biosynthetic process	Interproscan
GO:0017109	Cellular Component	glutamate-cysteine ligase complex	Interproscan
GO:0030234	Molecular Function	enzyme regulator activity	Interproscan
GO:0035226	Molecular Function	glutamate-cysteine ligase catalytic subunit binding	Interproscan
GO:0035229	Biological Process	positive regulation of glutamate-cysteine ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11205	GCLM; glutamate--cysteine ligase regulatory subunit	-	Cysteine and methionine metabolism	ko00270	PMID: 28812709
			Glutathione metabolism	ko00480	PMID: 28812709
			Ferroptosis	ko04216	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_36180-1.8 global RNA-seq network