| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_36159-8.8 | SSM4 PROTEIN | Bpl_scaf_36159 | 748018 | 786637 | - |
| CDS | |||||
| Bpl_scaf_36159-8.8 | |||||
| Transcript |
| Bpl_scaf_36159-8.8 |
| Protein |
| Bpl_scaf_36159-8.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF12906 | RINGv | RING-variant domain | Domain | Interproscan |
| PF13873 | Myb_DNA-bind_5 | Myb/SANT-like DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011016 | Domain | Zinc finger, RING-CH-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR028002 | Domain | Myb/SANT-like DNA-binding domain 5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13145 | SSM4 PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0030176 | Cellular Component | obsolete integral component of endoplasmic reticulum membrane | Interproscan |
| GO:0030433 | Biological Process | obsolete ubiquitin-dependent ERAD pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10661 | MARCH6, DOA10; E3 ubiquitin-protein ligase MARCH6 | EC:2.3.2.27 | Protein processing in endoplasmic reticulum | ko04141 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_36159-8.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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