Detailed information of Bpl_scaf_36085-2.21 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_36085-2.21RUVB-RELATED REPTIN AND PONTINBpl_scaf_36085261565272630-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06068TIP49TIP49 P-loop domainDomainInterproscan
PF17856TIP49_CTIP49 AAA-lid domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003593DomainAAA+ ATPase domainInterproscan
IPR010339DomainTIP49, P-loop domainInterproscan
IPR027238FamilyRuvB-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041048DomainRuvB-like, AAA-lid domainInterproscan
IPR042487Homologous_superfamilyRuvBL1/2, DNA/RNA binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11093RUVB-RELATED REPTIN AND PONTINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000492Biological Processbox C/D snoRNP assemblyInterproscan
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0016573Biological Processobsolete histone acetylationInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0031011Cellular ComponentIno80 complexInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0097255Cellular ComponentR2TP complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04499RUVBL1, RVB1, INO80H; RuvB-like protein 1 (pontin 52)-Wnt signaling pathway ko04310PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_36085-2.21 global RNA-seq network
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