Gene detail

Detailed information of Bpl_scaf_36076-2.17 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_36076-2.17	SOLUTE CARRIER FAMILY 5	Bpl_scaf_36076	180973	204424	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_36076-2.17

ATGTGGCGAGCCAACAGAGGAACAGTCAGTGGGTATTTCTTGGCAGGGCGAACTATGTGGTTTATACCGGTTGGAGCTTCCTTATTTGTCAGCAACATAGGAACGGAACATTTTATAGGTTTATCTGGTTCTGGAGCAGGCAGTGGTATAAGTGTTGGTGCCTGGGAATTTAATGCGATACTATTGCTGCAGCTACTGGGATTTGTATTTATACCAGTATACATAGCTTGTGGGACAGTGACTATGCCAGAATATTTGTCAAAAAGATTTGGAGGAACACGATTACGTGTGTACTTTGCTGTACTGTCTCTAATTCTTTATATATTCACCAAGTGTTCGGGAGATTTATTCACTGGCGCCTTGTTTATACAACAGTCACTTGGTTGGGATCTGTATCTAAGTATATTTATACTGATTGTCATTACCGGTGTAATAACTATTGCTGGTGGATTAACTGCAGTTATATATACCGACACAATGCAAGCAGTATTAATGATTGGTGGAGGCCTCACATTAATGGGTTTTGCTTTTAAAGAAATTGGTGGATATGATGGAATGGTACGTCGATATATGTCAGAGGACGCCATGACTAATGAATCGTACAGACTTCCGAATACCACATGTCACGAACCAGATCCCAATGCCTTCCGAATGTTACGGGAAGCAAATGATGACTATATGCCTTGGCCTGGGTTTCTGCTGGGTCAAACTCCTGGGTCAATCTGGTATTGGTGTGCTGATCAGGTTATCGTACAAAGACTTCTTGCTGCTAAGAGTGTATCACATGCACAAGGAGCAACATTGATGGCTGGATTTATAAAGATCCTTCCTTTATTCATGATGGTCATGCCTGGAATGATCAGTCGTATTCTTTATACAGATGAAGTAGCTTGTGTGGATCCAGATATTTGCTATGAAGTTTGTCAAAGTTATTCTGGGTGTACGAACATCGCTTATCCTAGATTAGTCTTAGGACTCATGCCAGAAGGGTTACGTGGTTTAATGATGGCTGTCATGATAGCCGCCCTTATGAGTGATTTAGATTCTATCTTTAACAGCGCAAGTACCCTGTTTACTATTGATATTTACAAAAGAATCAGAAAGAATGCATCAATAAAGGAGGAAATGATCATTGGCAGAATTTTCATTATTGTTATGATTGGAGTATCAATTGCCTGGGTACCAGTTATAAAGGAAGTACAAGGAGGCCAGGTGTTCATATACATTCAAGAGATAACAGATTATTTGGCTCCACCGTTTGCAGCTGTATTCCTGCTGGCTATTCTGGTTCCTCGAGTGAATGAAAAGGGAGCGTTCTGGGCTTTAATGATAGCACTATTGACTGGCATTATACGTATGATACTTGTATTTGTCTACCATGATTCTGGAAGCTGCAATAAACCAGACGAACGTCCGAGTATTCTGAAGAACTTTCATTATATGTACTTCTCTCTAATGATTACATTAATGACCGGTGTTCTAGCCATCGTTATCAGCCTGCTCACAGAGCCACCTGACGACAAATATTTATACAGGACAACATTTTGGACCAGATTTAGGACAGATGCTCCACCAGATTTAGATAATGACAACAACCAATTTCACAAGAAAAATTCAGGGGAGACAAACGTTGGGTATACAGTTAGTGCTAATGATATAGATCTTAATGTAAATGACGCCACATCACCACAGGTTTATACTATAACAGACGGAGACCAAAAGAAAAAGAAATTCCGAGATCCAAATTTACAGGACCAGGAGAACATAGAAGAGCTATCTTGCGGGGATAAAACGTTAAATGTTTTATGTGGATTTGGCGGATCAGAGAAGGATGAAGAAAAGAAGAAAGCTTTAGAAGAACACATTAAAATGGTTCAGTCATTAAAACAGGATCCGTGTGCTAAAATAATACTAAGAATTGGCATGGGGATTATTTTGGCAATAGGTACCTTCTTATATATTTTCTGGTCTTACTGGAAATATGAACCATAA

Transcript

Bpl_scaf_36076-2.17

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00474	SSF	Sodium:solute symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001734	Family	Sodium/solute symporter	Interproscan
IPR018212	Conserved_site	Sodium/solute symporter, conserved site	Interproscan
IPR038377	Homologous_superfamily	Sodium/glucose symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11819	SOLUTE CARRIER FAMILY 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005412	Molecular Function	D-glucose:sodium symporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006020	Biological Process	inositol metabolic process	Interproscan
GO:0015798	Biological Process	myo-inositol transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14383	SLC5A3, SMIT; solute carrier family 5 (sodium/myo-inositol cotransporter), member 3	-	Transporters	ko02000	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_36076-2.17 global RNA-seq network