Gene detail

Detailed information of Bpl_scaf_35877-1.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_35877-1.9	IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG	Bpl_scaf_35877	133581	141992	+

Gene Structure

More details in Jbrowse Sequence

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01592	NifU_N	NifU-like N terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002871	Domain	NIF system FeS cluster assembly, NifU, N-terminal	Interproscan
IPR011339	Family	Iron-sulfur cluster assembly scaffold protein IscU	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10093	IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005759	Cellular Component	mitochondrial matrix	Interproscan
GO:0006879	Biological Process	intracellular iron ion homeostasis	Interproscan
GO:0008198	Molecular Function	ferrous iron binding	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051537	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04488	iscU, nifU; nitrogen fixation protein NifU and related proteins	-	Non-coding RNAs	ko03100	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_35877-1.9 global RNA-seq network

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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