| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_3520-2.8 | SOLUTE CARRIER FAMILY 22 MEMBER | Bpl_scaf_3520 | 222956 | 256827 | + |
| CDS | |||||
| Bpl_scaf_3520-2.8 | |||||
| Transcript |
| Bpl_scaf_3520-2.8 |
| Protein |
| Bpl_scaf_3520-2.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | Family | Interproscan |
| PF16977 | ApeC | C-terminal domain of apextrin | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005828 | Family | Major facilitator, sugar transporter-like | Interproscan |
| IPR005829 | Conserved_site | Sugar transporter, conserved site | Interproscan |
| IPR020846 | Domain | Major facilitator superfamily domain | Interproscan |
| IPR031569 | Domain | Apextrin, C-terminal domain | Interproscan |
| IPR036259 | Homologous_superfamily | MFS transporter superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24064 | SOLUTE CARRIER FAMILY 22 MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0022857 | Molecular Function | transmembrane transporter activity | Interproscan |
| GO:0055085 | Biological Process | transmembrane transport | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K08202 | SLC22A4_5, OCTN; MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5 | - | Choline metabolism in cancer | ko05231 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_3520-2.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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