Gene detail

Detailed information of Bpl_scaf_34737-1.8 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_34737-1.8	SACCHAROPINE DEHYDROGENASE	Bpl_scaf_34737	49555	101586	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_34737-1.8

ATGTGGAAGACTCATTCTCAGTCATTGTGTAAACAGATTCTCAAACAAAATGGCTCCATATTTACCAGGGGAATGTCTGGCTTACCGGGCGTGTTGGCTATCAGAAGGGAAACTATTAATGTCTGGGAAAGAAGAGCACCTCTATCCCCAAGTCATGAATATGCCAAAGTTGGAGCAGTGATACAAGAAGACATGAGTGAAGCCTCCTTGGTTATTGGTGTCAAGGCTGTACCTATAGACTTACTTATTCCTGACAAGACTTATGCCTTTTTTTCTCATACTATCAAAGCACAGGAGGCTAATATGCCTTTATTAGATGCTATTTTAGAAAAGAAAATCAGGTTGATAGACTATGAACGCATGGTTGATGATAAAGGACAAAGAGTGGTAGCTTTTGGTGTATATGCAGGAGTAGCTGGGATGTTGAACATACTACATGGTCTTGGACTGAGACTGTTGGCACTGGGTCATCATACCCCGTTTATGTATATTGGACCTAGCCATAATTACAGAAACACAGAACAGGCTAGACAAGCTGTACGAGATGCTGGATATGAAATAGCTTTAGATAGAATGCCAAAATCACTTGGACCTTTAGTTTTTGTATTTACTGGCTCTGGTAATGTTTCTCAGGGAGCACAGCAAGTTTTTCAAGAATTCCCACATGAGTATATTGAACCGGAGCACTTGCCTAAAGTGGCAGAAAATGGTGCTACAAACAAGCTGTATATTTGTGTTGTGAGTAGAGATGACCATTACGTACGAAAAGATGGTGGAAAATTTAATGCTGAAGAGTTTGAACAATATCCGTCCAGATATGCTTCTACATTTGCTACAAAGATTGCTCCCTATGCTTCAGTCATTATTAACGGAATCTACTGGGCACCTGAAGCCCCTAGACTGATAACTATCCCAGAGGCCAAAAACCTGTTACAACCAACGTCGTTTCCATGGATACCATCCAGCAAGGGATGTCCACAGTTACCACACCGTCTTCTAGCCTTGTGTGATATATCAGCTGATCCTGGAGGTTCTATAGAATTCATGAATGAATGCACAACAATTGATAAGCCATTTTGTTTGTATGATGCTGATCAAAATAAGGAAACAGACAGTTTTGCAGGAAATGGTGTATTGATCTGTTCCATTGATAACATGCCAGCACAAATACCAAAGGAAGCTACAGATTTCTTTGGAAGTTTGTTGTATCCCTATTTGAGAGAAATGTTGAAGTCCAATGCCACAACACCATTTGAAGACTTTGACACAACTCCTGTTGTAAAAAATGCAGTCATTGCATCCAATGGAAAACTGACAGAGAATCATGAATATATATCAGATCTAAGAAGAAGGTTTTCGTCATCCCACAAAACCAAGAGGATAAGTCCTGAACAGAAGAAGATATTAATATTAGGAGCAGGATATGTATCTAGTCCTGTCATAGAGTATTTAAACAGGGATAAAGATTTTATTGTTTCTGTTGTATCTCAGTTTAAAGAAGAGTTAGATAAGTTACAGAAGCAGTATCCACAGAATGAGATGTTGCTGATGGATGTACAAAGAAATTATGAAGAACTCGAAAATCTGATTCCAGAAAATGACATAATTATCAGTTTGTTGCCATGGCATTTACACCCTGAGGTAGCCAAACTGTGCATTAAGCACAAAAGAAACATGGTAACTGCAAGTTATGTCTCACCAGAGATGCAAGAATTACACAAAGAGGCAGTATCAGCAGGGGTTACAATTATGAATGAAGTTGGTGTTGACCCTGGTATAGATCATATGTTAGCCATGGAATGTTTTGATGGGGTTAAAGCTAGTGGGGGCAAGATTATATCCTACGTTTCATGGTGTGGTGGATTACCTGCCCCTGAACATTCAGACACACCCTTGATGTACAAATTCAGTTGGTTTCCCATTGGTGTGCTGAGAAATTGTCTGGCTGGAGCTACTTACCTCAAAGATGGTCAGAGGGTAGAAATTCCTGAGGGAGGTTTGTTAGACAATCCAGAAGAATTGACATTCTTACCAGGATTTAGTCTTGAGGGAATTCCTAACAGAGACTCTACAAAGTATTCATCAATCTATGGAATAGAAACTGCTCAAACTATGCTGAGGGGGACTATTAGATATAAGGGATTTAGTGATGTCATTCAAGGTCTTGTTGCACTGGATTTGTTGAACCCTGAAGAGACTTCAAATCTTCATCCAAGTGGACCAGACATGTCATGGGTAGAGATAAATGCAAAAAAAGCAAACCTGGTGCCAAAGAATGCCACAAAAACAAATTATAGAGCAGCCAGACTCTTGAGAATTTATTTAGAAGACCTTAAAGAAGATTCAAACTTTGAAAATCTGGGCTTACTGGATGATCAGGTTATTGAGAAGAAAGGAACTCCCTTAGATACACTTTGTCATTATCTAGCTAAGAAACTGGCATATGAGCCCAATGAAAGAGACATGATTTTGATGCACCACAATATTGGAGTCCAGTGGCCAGATGGTTCATTACAGAAAAGGACTGTTGGACTGACAGTATATGGTGATTACAATGGCTATTCTGCCATGGCAAAGACTGTTGGTCTACCTACTGCCATCGCTACCAAGATGATTTTGGATGGTGAAATTCAGAGGAAAGGTATCCAAATACCTATGTCACAAGAAATTTACAGACCAATCTTGTCACGATTGAAAGATGAGGGAATCACAGCTACAGAGAAGACATATAGTGTTTAA

Transcript

Bpl_scaf_34737-1.8

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01262	AlaDh_PNT_C	Alanine dehydrogenase/PNT, C-terminal domain	Domain	Interproscan
PF03435	Sacchrp_dh_NADP	Saccharopine dehydrogenase NADP binding domain	Family	Interproscan
PF05222	AlaDh_PNT_N	Alanine dehydrogenase/PNT, N-terminal domain	Domain	Interproscan
PF16653	Sacchrp_dh_C	Saccharopine dehydrogenase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005097	Domain	Saccharopine dehydrogenase, NADP binding domain	Interproscan
IPR007698	Domain	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain	Interproscan
IPR007886	Domain	Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal	Interproscan
IPR032095	Domain	Saccharopine dehydrogenase-like, C-terminal	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR051168	Family	Alpha-aminoadipic semialdehyde synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11133	SACCHAROPINE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004753	Molecular Function	saccharopine dehydrogenase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0019878	Biological Process	lysine biosynthetic process via aminoadipic acid	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14157	AASS; alpha-aminoadipic semialdehyde synthase	EC:1.5.1.8 EC:1.5.1.9	Lysine degradation	ko00310	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_34737-1.8 global RNA-seq network