Detailed information of Bpl_scaf_34737-1.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_34737-1.7NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERBpl_scaf_34737152788163033+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR037363FamilySec13/Seh1 familyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11024NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0031080Cellular Componentnuclear pore outer ringInterproscan
GO:0032008Biological Processpositive regulation of TOR signalingInterproscan
GO:0032527Biological Processprotein exit from endoplasmic reticulumInterproscan
GO:0090114Biological ProcessCOPII-coated vesicle buddingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14004SEC13; protein transport protein SEC13-RNA transport ko03013PMID: 28812709
Protein processing in endoplasmic reticulum ko04141PMID: 28812709
mTOR signaling pathway ko04150PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_34737-1.7 global RNA-seq network
TOP