| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_34414-6.25 | LUPUS LA PROTEIN-RELATED | Bpl_scaf_34414 | 552016 | 580391 | - |
| CDS | |||||
| Bpl_scaf_34414-6.25 | |||||
| Transcript |
| Bpl_scaf_34414-6.25 |
| Protein |
| Bpl_scaf_34414-6.25 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21071 | LARP1_HEAT | LARP1 HEAT repeat region | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006607 | Repeat | LARP1-like, DM15 repeat | Interproscan |
| IPR006630 | Domain | La-type HTH domain | Interproscan |
| IPR045180 | Family | La domain containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22792 | LUPUS LA PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000339 | Molecular Function | RNA cap binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0010494 | Cellular Component | cytoplasmic stress granule | Interproscan |
| GO:0045727 | Biological Process | positive regulation of translation | Interproscan |
| GO:0048255 | Biological Process | mRNA stabilization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K18757 | LARP1; la-related protein 1 | - | Messenger RNA biogenesis | ko03019 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_34414-6.25 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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