Detailed information of Bpl_scaf_34352-1.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_34352-1.3DEHYDROGENASES, SHORT CHAINBpl_scaf_34352111665158811-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106adh_shortshort chain dehydrogenaseDomainInterproscan
PF01575MaoC_dehydratasMaoC like domainDomainInterproscan
PF02036SCP2SCP-2 sterol transfer familyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002347FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR002539DomainMaoC-like dehydratase domainInterproscan
IPR003033DomainSCP2 sterol-binding domainInterproscan
IPR020904Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan
IPR029069Homologous_superfamilyHotDog domain superfamilyInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036527Homologous_superfamilySCP2 sterol-binding domain superfamilyInterproscan
IPR051687FamilyPeroxisomal Beta-Oxidation EnzymesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45024DEHYDROGENASES, SHORT CHAINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12405HSD17B4; 3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase / enoyl-CoA hydratase 2EC:1.1.1.35
EC:4.2.1.107
EC:4.2.1.119
Primary bile acid biosynthesis ko00120PMID: 28812709
Peroxisome ko04146PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_34352-1.3 global RNA-seq network
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