Gene detail

Detailed information of Bpl_scaf_34041-4.5 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_34041-4.5	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	Bpl_scaf_34041	375014	404417	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_34041-4.5

AAAAATTATCTATCTTGTGTAGATGGCGTTGTAGTCAAAAATGGAGAAGAATTTAGGCCCGCTTGTTAATAATTTTGAAGTTCCTACTTGGGGAGGTAAACCACCACCTGGTCTTCATTTAGATGTTGTTAAGGAAAACAAAATGGTGCAGAAATTAATGATTGACAACAAGAAATGTTACTTCTTTGGCAGAAATAAACAGTTATGTGATTTTTGTATTGACCACCAGTCTTGTTCACGAGTACATGCAGCATTAGTTTGGCATAAACATTTATCACGACCATTTATCATAGATTTGGGTAGTACTCATGGTACCTTTATTGGTAGAATTCGATTAGAGTCGAAGAAACCACAGCAAGTTCCAATAGATAGTGAAATACACTTTGGGGCATCAACTAGAATATATATCATACGTGAGAGACCACAGCCAATGTCTGGTCAAGTTACAGACGATAAGGATAAACGAGGAGAGGACCTAGAGGGAAGTTTGTTAGGGTTACCAGAAACAGAAACTGAATTAGATAATTTAACAGAATTTAATACTGCACACAATAGGCGGATAAATTCTATGATGGAAAAAGATGGTCCAGCCCCCAATCCATTGAAAAGAAAACATAAATCTCAACATGTATTCTTCCATGATGAAGAAGAAGTTATAAACCCAGAGGATATTGACCCAACTGTTGGAAGGTTTAGAAATCTTGTATCAACTACAATAATTCCTACAAAGAGACAGAAAATGGATGGAAATTTGTTATCATCATCAGGTTCAATGACAGACAATATTACCAAAAGATTACAAAGTTTTTCTTACTCAAATCCTAATTTATATGGTGATATACCATCTAGTGACACTACTGCAAGTATTGCCAGCAAAATGGGACTTCATTTACCCAATTTGGCACCTGACATAGATGAAGAACAACCTATGCCAGTGCTGGACAATCAACAACCGGTTGTGTTCCAAGTGGAAGAAATCTCCAAGGAACCCAGAAAGAAGAAATATGCCAAAGAAGCATGGCCGGGCAAAAAACCAACGCATTCATTTTTAGTGTAGCAATTGTATCATTTTTACCATGTTTACTCATTGAATTTTAGTCAAAAGGATTGTGGATTTAATTGTTATTCCACTTCTACAAGAGTAATGTCATTATTCATAAACATCATGAACATAGACAGTGGAAGGTTGATTTTTGAATCCATAATGATTAACTAGGAAAGAGACCTTGATAATGTTTGATGTCTCTAAAAAATCAATCATAAAAATTTATATTGATGGTGTCTGCCATTTTGGTTATTTTTTGTCACTAAGCATTTTTAACATGGAATATATTAAAAATATAAAATAACACCAAATAGACCATTTAGAAAATATAAAGTCAACATATTTTCAATGTATGTCGTGAAAATATTACTTGAAATTGTTCTGATGTTACTACAATATCTCATCCATATTCATGAGCTGCTTTGCTTGACATGCCATTGTGCAGACTTGCAGTTGCTATTTAATTTTTTTTTAAATTAAAAAATTGCAATTGATCAAGAAAAAAAACTAGGTTGCATGATAATTTTAGCAGATTCTGCCAGAAAAAGCAACAGGAATTAGGTTTTGTCAAGAAATAATAATAAAAGAACTTACAGAAAGCTTCAGTATAACCATTGGTTGGAGTTAGAAAAATACTCTTAGATCAAGAGTTATAAACAAATAACTCCAATCCATACCCCTTTCTATTTTGGCATTTGTTTTTCAAATTTCGTCAATGTGATTGTAAAATTCAACTGTTTTCAATCGGATAATAATTCCTAGAATCACATTCCATCAACATTTTCCGACAATATAAAGATATTTATTATAACATATACTTCTTCATCCATATGTTAGACCACATCCAGTGGTGTAATAGTTGGCATGCTGGCCTGTGTGCGGTGGATCGTGGGTTCAATTGCTGGTGTAATAGTTGGCATGCTGTCCTGTGTGCAGTGGATCGTGGGTTCAATTGCTGGTGTAATAGTTGGCATGCTGTCCTGTGTGCGGTGGATCGTGGGTTCAATTGCTGGTGTAATAGTTGGCATGCTGGCCTGTGTGCGGTGGATTGTGGGTTCAATTGCTGGTGTAATAGTTGGCATGCTGGCCTGTGTGCTGTGGATCGTGGGTTCAATTGCTGGTTTTGTGAAACAAACCACAGTGAAATTGGTATATGCTGCTTCTCCACAAAGAACGCAACATGAAGGAGCAAGAGTAAAGACTGGTTGACTGGGACTCATGATAATGTGTCAGAGTGGAGGGACCAGTCTACCAGTGGGCTGTTTGCTTGGTGAACTAGCACTATGAAAATCAAATAAACATGTTAAACAAAGTGAACATCATTATCATTTCATCAAAAGTCACTTGTTTTCGCCATGATATAGTTGAAAAATTGTTCATGGCGTTAAACAACAATCACTCACTCATCCCATCAGCATTTATGTGGGTGAATTCTTATGTAGGCCTAATTACTGATGATAGCAACAGATACACATCTTAAAACTTTTATACATTTGTACTTTGTCTTTTTAGTGTTAAATTAACATTTCATTGCACAAAAATTATAGGAGTAAAGAACTGAAATTTGCAGACACTATCCCTTTAAAAGCCAAACTGCAAAGCACAATATAGCATTACTGTTATCTAAGGTTGTTGCTTATCTTGTTAATGGAGTACAATGTATATAATATGGATGTTTTATGAGAACAAATATTATCGGAAAAAAAAACAATCCTATCTCAACATCACCTTAACATTTAAATACTGAGAAAAGATGTATGAGCAGGTGGAAACCTAGGTCTTACACTGGGACAGAGACAAAAATATAGCTGGGTTAAACAGATTTAATGGGATCAGAACCCTCATATCTTAAAAAAAACACTTTTATAGGCTAGACAATCAAAAGACCGCAAGCTATAGCAAATTATGACAACATAAATATTGTCAGTTAGTGGTTTTCTCCGGGTCCTCCGGTTTCCTCCACCAATAAAACGGACTGCCACAGTATAACTGAAATATTGTTGAAAGTGGCGTTAAACACCATAAACCACAACAACTTCAATAATTGTTCTACTGAATGTAATAGCTACTGACTGAATATATTATGTGGTAGTTAAGGTTGTAGACCATTGTTTTAAGGATTAAAAATATTACCAAGTAATACTTCTTATTGCTTTAATATCAATTAGTTATCAATGTCCAAAGAAAGTAATGGTCTTCATGAGACACCAGATGTAACACAAATCATCAGATTGTTGCAATTATATTTGTACATACATTTTGTATTATTATGTCATATAGCAACAGGAAAAAAGTCTTCAAATTCAGTCATAAAAAAAATTATATTTGTACAAAGAAACTTGTCTCAAAGATTTTTAACTATTCTTGCAAAAATGACCTTTTTGGAGTACAATTTTTCAACATGAGATTTATTTGTATTACAGGCCAAATGTGATCGATGTTCACCGAACAAATCCTCCTGCTTTGTGCCGCATACAAATAAATCTCATATTTTAAGACACTATACTCGTATCATTTTTATAATGCAATTTAAGTGTTATTACTTGTTTTATATATTTTTTAGAATATTTTATTTACATTGTATGTCTTCAACCCTTTGATTTTATTTGTGTAGTGAAATATCAAGTAAATGTGGCATAATCTGCTGTTTTACATTACACAACATTAACAAGAATGTCAAATGGAACAAGAATCATGTTTTACATTACACAACATTAACAAGAATGCCAAATGGAACAAGAATCATGTTTTACAAAAATAAAGCATCTGAAAATAAATATTTTAACAACCTTGACAGCTAGAAAGCAGGTCATGTTTTAACACTAGATTTATCAGCCACATAATGGAGGTTATGTATGCAAAAATCATTTTTTGTTTCTCTATTTGTGTCAAAATATATATAATAGCACAGTCTATCAATTCTTGAGTATGTCAGTTAATGTTTTTGATCACTCACTCAAAGCCCTTGTGACCTTTTGCCATCAATTGTCTACTGTCCATCCATAAACTTTACACATTTTAATCGTCTTAGCTGAAAGAACAGAGCTATTGGATCAATACACTGAGAAAGGATCTGTGATTGGTCCTCGAAAAGGTTCTCCCTCCAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR050923	Family	Cellular Process Regulator and RNA Processing Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23308	NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0004865	Molecular Function	protein serine/threonine phosphatase inhibitor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016607	Cellular Component	nuclear speck	Interproscan
GO:0035308	Biological Process	obsolete negative regulation of protein dephosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13216	PPP1R8, NIPP1; nuclear inhibitor of protein phosphatase 1	EC:3.1.4.-	Protein phosphatases and associated proteins	ko01009	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_34041-4.5 global RNA-seq network