| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_34-3.10 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B | Bpl_scaf_34 | 419837 | 432879 | - |
| CDS | |||||
| Bpl_scaf_34-3.10 | |||||
| Transcript |
| Bpl_scaf_34-3.10 |
| Protein |
| Bpl_scaf_34-3.10 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06209 | COBRA1 | Cofactor of BRCA1 (COBRA1) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010405 | Family | Cofactor of BRCA1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13503 | NEGATIVE ELONGATION FACTOR COMPLEX MEMBER B | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0032021 | Cellular Component | NELF complex | Interproscan |
| GO:0034244 | Biological Process | negative regulation of transcription elongation by RNA polymerase II | Interproscan |
| GO:0045892 | Biological Process | negative regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15180 | COBRA1, NELFB; negative elongation factor B | - | Viral life cycle - HIV-1 | ko03250 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_34-3.10 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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