| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_33996-2.11 | CULLIN | Bpl_scaf_33996 | 246662 | 280735 | + |
| CDS | |||||
| Bpl_scaf_33996-2.11 | |||||
| Transcript |
| Bpl_scaf_33996-2.11 |
| Protein |
| Bpl_scaf_33996-2.11 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 adaptor Cullin RING|Cullin |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00888 | Cullin | Cullin family | Repeat | Interproscan |
| PF10557 | Cullin_Nedd8 | Cullin protein neddylation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001373 | Domain | Cullin, N-terminal | Interproscan |
| IPR016157 | Conserved_site | Cullin, conserved site | Interproscan |
| IPR016158 | Domain | Cullin homology domain | Interproscan |
| IPR016159 | Homologous_superfamily | Cullin repeat-like-containing domain superfamily | Interproscan |
| IPR019559 | Domain | Cullin protein, neddylation domain | Interproscan |
| IPR036317 | Homologous_superfamily | Cullin homology domain superfamily | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR045093 | Family | Cullin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11932 | CULLIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0019005 | Cellular Component | SCF ubiquitin ligase complex | Interproscan |
| GO:0030674 | Molecular Function | protein-macromolecule adaptor activity | Interproscan |
| GO:0031146 | Biological Process | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0031461 | Cellular Component | cullin-RING ubiquitin ligase complex | Interproscan |
| GO:0031625 | Molecular Function | ubiquitin protein ligase binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03347 | CUL1, CDC53; cullin 1 | - | Protein processing in endoplasmic reticulum | ko04141 | PMID: 28812709 |
| Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 | |||
| Wnt signaling pathway | ko04310 | PMID: 28812709 | |||
| Hedgehog signaling pathway | ko04340 | PMID: 28812709 | |||
| Hedgehog signaling pathway - fly | ko04341 | PMID: 28812709 | |||
| TGF-beta signaling pathway | ko04350 | PMID: 28812709 | |||
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Cell cycle - yeast | ko04111 | PMID: 28812709 | |||
| Oocyte meiosis | ko04114 | PMID: 28812709 | |||
| Circadian rhythm | ko04710 | PMID: 28812709 | |||
| Herpes simplex infection | ko05168 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_33996-2.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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