Gene detail

Detailed information of Bpl_scaf_32987-0.26 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_32987-0.26	VACUOLAR ATP SYNTHASE SUBUNIT H	Bpl_scaf_32987	149078	163956	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_32987-0.26

AACAAATATCGATCACATGATTATTATTTCCTGCCAAGAAAGCAGTCGATTTTTTCAAAATGATTGATAGAAAAACGTTGCCAGTTGTTATCGTTACAGGGTTCTGGGGATTTGTTGGAATAATTTGTCCAATCCTGATACAACTGTTTATGAGAAGATCTGCAAATAAAGGAGTTGTACAATTGATGCTAGCGATGAGTGCTGCTTGCTGTTGGCTTTTCTGGTTATGTGCTTTCCTGTTCCAATTAAATCCATTAATGGGTCCAGCCTTAGAAACATCATTAATTAGAGTTATACAGGCTGAATGGACACCTGATCCTAATAGTAAATCATGGGAGTGATCATTCCAAGGTTAATTCATTAGCTAGTCATCATTTCATGTGATAGAGAAAGAAGAAGAAAAATTAGTGTTTCCTGTGGCCACATGGATTCATTCATAGATAATATTTTAATAACCAGAACAATTTTGGCGAAACATTTAAAGTTTACCATTATTTTACATTACCTTGTTACATTAGATAATATGTCACCAGCTTTCTTCTCAGATACAGAATTTTACTAGTGTATGTAATCATTTTTACATCTTCAAATTTTCTGGGTGCGTACCATTGCTCCGACAGCCCATTATTCCAACGACCCATTATTCCGACAGCCCATTACTCCGATGGCCCATTTTTCCGACAATATAAAATAGAACTCAATCCACAAATCCATGGCTTAACTTCGAATTTTTTTTCTGAAAAATGGCTTGAGGAATCAAAACCAAGCGTGACATATATTTTCCAGTACATGAATGTCCTTTACTGCATTGGTGGTAAACAGATATTCAAAATGGTCCCTCGGCAGCAGTGTAGGTAAAGGTTTACATTTATGGTAAATAATAATTTGCTATTAAAAACCTCTGAATTGAAATTGGCTACTTTGTTTGTTGCATGATCGAGAACTCAAATGTGATTTTTAGACCAAATAGATTTTATTTTCAGACACGAATTTGTTCCCTACCCACATTTTTACCTTCGAATTATAATTTATTTTCCATTTTCGTTTAATTTATTAAAAAATTTCAAAATAATATTAAAATTTCATGCAATTTAGGCACGGACCATTTGATATTTTTTGGATGAGAGAAGGCTAGGGGACAGGGCTGGGATTTTCGTCCGGACATATTTTTTTTTCGGTAAAAATCGGGGCAAGAAATGAAACCACCCCCATCCCTCCAGTAATTTTTTGTCGTCTCGCGTAAAGGTGGCGGTGTAAACTTTTCATGATTAAATCCAAAATGTAGAAGTGTTAGACCATCCGAAATAGGTACTGATATTTCTCATGTCGTCATGATGTAAGGAATCTGCCAGCACCATGACATTTGACTTTGACCCCATATTTACCCTTTAGTTTAATACAGAAACAATCCACCTAGTGAGTATAAAGATTAAAGTCAGTCTTCCGTTAGGTATAGAAGAAAAACAACAGCTTTTAGGATAATTATACTATGACCATTTTTGACGGAATAATGGGTTGACGGAGAAATGGGCTGTCGGAATAATGGGACGTCGGGGCAATGGGCTGTCGGAATAATGACCTGACCCCAAATTTTCAGAGTACTGAGCAAAAATGTGTTCACCTTCTTCCAGCAAAGGGGAGTTAATTTAGCCTATTTGTATTGACAGTGAAACCTGTGATAATTAAACAAATATAGGGAGAAAATATTTGATGTGTATATAACATGTTTAATCCACTTGTCTATCTGTAACAAAAAAAACTTGTGTTCTCATTAGACAGGTTCGTTGTCCTGATTAGACAGGTTTCACTGTTACATGGAAGGGAATTGTATGTGAATCGTGACATACATCTTCATCACCATTTGTTGTAGACTGATCACTTATACACAAGAATAGAAAGTGTACATGTTCTGTTTTATTGATGTAAATTTATTGTATGTATAAATAATTTGTAAATAAATAGAAAATCTGACATAGTTATCATTGAACAGTACAAACAAATTGATTCTATTTAAAAACAGGGTGCTCCATGAAATTTGTAGTCCTTTTCTGTCTTAAGTGAATATAAATTTGTTTTGTATGCTTCTTGTAGATACACATTTTGTTGCCTGATGGATTTTATAGAGAAAGGGAGATAACCCTCTACATGGGTTTTTTAATTGTATTTATAGCTCTAAACTAAACATATAAAAAAAAAAGAAGAAAAAAAGCTCAATGGGCTTACGATTCTGATCTTATTAAAAGGTATATATACTAACATAAGACCATATGGGTAAAATGTTTGGACCAATCTCAGAAATATACTGAGAAGATTAAAACTGTTTTATTCATCATTTATGATGCCTGATGGGACACCACTCAAATGATCAGACTTACTTACAGTCGCTCAAAGGATTTCATTATGTACTGGTCGCCACAATATATTTGATATCGTTCACAAGTCATTCATTCAGTCATTCAGAAAGATAGCTTCAAACAGGTTAAGAGTCGTTCTGGTTGCAATCATATGAACACACCTGTATATGATAAAGATTGTCTGAGAGATGTGGCTTTCTCTGGTTTCTTGTACCAATAAAAATCGAAGTGACCTCAACAATATACTGGAAATGTTTTTAAAATTACACTAGCATAATTCTAACAAACAAGTGAAAAACTGAATCCTATTAGTCAAAAACTAAATAAATACTGAATTTTATTTTATTTAATAAATCTAATGCTTTACAGATCTGTAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05493	ATP_synt_H	ATP synthase subunit H	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008389	Family	ATPase, V0 complex, subunit e1/e2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12263	VACUOLAR ATP SYNTHASE SUBUNIT H	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0033179	Cellular Component	proton-transporting V-type ATPase, V0 domain	Interproscan
GO:0046961	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02153	ATPeV0E, ATP6H; V-type H+-transporting ATPase subunit e	-	Oxidative phosphorylation	ko00190	PMID: 28812709
			Phagosome	ko04145	PMID: 28812709
			Collecting duct acid secretion	ko04966	PMID: 28812709
			Synaptic vesicle cycle	ko04721	PMID: 28812709
			Rheumatoid arthritis	ko05323	PMID: 28812709
			Vibrio cholerae infection	ko05110	PMID: 28812709
			Epithelial cell signaling in Helicobacter pylori infection	ko05120	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_32987-0.26 global RNA-seq network