| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_32204-5.6 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | Bpl_scaf_32204 | 531137 | 547943 | - |
| CDS | |||||
| Bpl_scaf_32204-5.6 | |||||
| Transcript |
| Bpl_scaf_32204-5.6 |
| Protein |
| Bpl_scaf_32204-5.6 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | MYB |
| Ubiquitin Family | UBD|Other|Jab_MPN |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00249 | Myb_DNA-binding | Myb-like DNA-binding domain | Domain | Interproscan |
| PF01398 | JAB | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | Family | Interproscan |
| PF04433 | SWIRM | SWIRM domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000555 | Domain | JAB1/MPN/MOV34 metalloenzyme domain | Interproscan |
| IPR001005 | Domain | SANT/Myb domain | Interproscan |
| IPR007526 | Domain | SWIRM domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR017884 | Domain | SANT domain | Interproscan |
| IPR017930 | Domain | Myb domain | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR037518 | Domain | MPN domain | Interproscan |
| IPR050242 | Family | JAMM/MPN+ metalloenzymes, peptidase M67A | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10410 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008233 | Molecular Function | peptidase activity | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11865 | MYSM1; histone H2A deubiquitinase | EC:3.4.19.- | Peptidases and inhibitors | ko01002 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_32204-5.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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