Gene detail

Detailed information of Bpl_scaf_31979-0.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_31979-0.4	G-PROTEIN COUPLED RECEPTOR 143	Bpl_scaf_31979	21586	48555	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_31979-0.4

ATTTTCTGGATGCTTCAAAGGAACGACAACTCTGGATAGAGAATGCAAAGCGATAGGAACTTTTTTTCCTAAAAAACGGACTACTTTTGTTCTAAGGTCTGGTTGGTGGTTTAGTGGTTTGATACCAAAAATGTAGGTCCGACACTGTACACACACACACACAAATATATTCCTATTATAATAGGAACTTTCTAATTTTGTGATTTTATTACGCCGATCAAATCAAAACAAGTACGACCCACCAAAATGATATCTGGTTTCCTACTCTTATCCGAAACTCCTCGCGCCTTTCCCTAAGTGAAAACACAAGCTCGTTTTTCACTTGGGGAAAGACGCGATGAGTTCCGGATACTTCTCTTATGCTACTATAAATAAATAAACACTAAAACAGGGAACCAGAAGTATCACAACAACTTAAAACGAAAGATCACATGCATTATTGTTTTTCATTTCCAGCAATATTAACATTAAATTCTAGCTCTCTACTGATGGAGGAAGGATCTCTCTAATTGTTGATCTGTAGTCAGTATGGCCTCTGTAGCATTTTTCCATACCTGTAGTGTTTATCATAATGTTTCTGAACATGTGCACAATCTACCTGAGAAATTACTGATAGAACAAGTTGTTACTATTGTGGCTATTATTTTCTGTTCAATCAGTCTGGTTTGTGTTATTTATTTGATATTACCAAGAGACCAAACAGGTTCTGAATTGTGGAGACATCCAGGACGTATATTGGTTGGACCAAATTTAAATGAAATAATTAAAGCCATTGTGGTTACAAGTTTTATTGGAACATTAGGTATACTTATAAGGTCGTCAACTTTACTTGGAGAAAATTTTCCACATCCAGGTCATCAGTTGACCTCAGCGGGAGAATTTTGTATTGTTATTAATGTCATCATTCAGTACTTCTACCAGTCTTCCTATTTCTGGATTTTTTTATATGCCATGGAAGCATTAATGGTCAGCAACAATAAAGAAATACCTACATCTTTAAAGTACACATTAGGCTGGATATTACCTGGTATAGTATGTGCAGGAGGATTACTGTTACTTTATAGCCATGGCTTTGTAGAATATGAAAGCAAAAGCTCCGTAGAAAGAGGAATTTTATATTTTATTTTTCTGCTTCCCATGATACTAGTGTTATTTTTTAATCCAGTTCTGTTTTATTATGCTGCAAAAGCAGCAAAACGTGCACTGATATGTTACTATGGGAGATATACTGCTAGTGAAAGAAAATTAATTGATTCAATCCATTTTAAGTTTGTACTGATAATGGCTGCTTTTCTGGCAAGCTGGTTGCCAAACTTGATAGATTCTTGTATTCACATGGCAGATTATAGAAATAGAACAGCTAAACTAACAGTCTGGATTATAATGTCAGTTGTAAACCCTCTGCAGCCAGTGTTGACAGCGTTAGTATTATGGGGACTTCCAAAAGACAACATCTCATTTTCAACTTTATGGAAGAGTAAATCTACTAATATGTCTGACATTTCAGCCAGCCATGTTGACTTTTCCCGCAGCACAGGCAGTGAGACAGAACCACTCATCAGTTTTCGTAGAGCAGATACTAAATAATATTATATCAACTTAAGTGTGTCCAAATCAGTCTTCTTAGAACAGATACTAAATAATATTATATCAACTGGAGTGTGTCTAAATCAGTTTTCTTAGTACAGATACTAAATAATATTGTATCAACTGAACTGTGTCTTAACAAAATGCCAAAATGACAGTTTTTATTGAACAGACATTTTGTATAGATAATTTGACATGTACATCTGATGTTTCAGTTCTGTAATTTACTGGTCTCAATACTGAATTTCTTTAGGTGTCAAACCACTAATTCACCAATCAGAGCTTGGAACATATACGAAAGTAGTCCCTTTTCAAGAAAAAAGTTCCTTTCACTTTGTAGTATTGTGAAAACTACTGAATGGAATGGACTAATTAAAATTGATAATTGAAGTTAAATATATAGGGATTATTTTGAGCCCAAATTTGATGGACTTAGTTGTATTTTAATACCTCTATGGAGGATTTGATGCATGACCTATAAATACTGAATTTCTTTGGGATGATCGAGCTATTTTTAGAGTAGGTACTTTCCGTAGCATGGCATTTCTCTGCAAGATTTTAAACATGCCCTGATATTTTGACAGAACATAGAGGAATCATGTACGTTTCAGAAAATATATGGTCTTGGAAAGGTTAAACTTAAGAAAAAATGACCAGGTAAGCTCGAAAAAACACAAATTTAGTAGAAAACCTTAAAGAAATTAATTAGTGGTCTTACACCTTTATTGTTTACAGATCATTGCACATTCCAGCTTTGATTCTAAAATTACATGTTTTTTTATAGGAGTTATTTTTTAAGGAGAACAAAATTATCTTGAAATTTGTAGATATTCGAACTTAATAAACTATCAGAGGAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02101	Ocular_alb	Ocular albinism type 1 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001414	Family	G-protein coupled receptor 143	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15177	G-PROTEIN COUPLED RECEPTOR 143	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0032438	Biological Process	melanosome organization	Interproscan
GO:0033162	Cellular Component	melanosome membrane	Interproscan
GO:0035240	Molecular Function	dopamine binding	Interproscan
GO:0035643	Molecular Function	L-DOPA receptor activity	Interproscan
GO:0050848	Biological Process	regulation of calcium-mediated signaling	Interproscan
GO:0072544	Molecular Function	L-DOPA binding	Interproscan
GO:0072545	Molecular Function	L-tyrosine binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08470	OA1, GPR143; ocular albinism type 1 protein	-	G protein-coupled receptors	ko04030	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_31979-0.4 global RNA-seq network