| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_31557-3.5 | MATRIX METALLOPROTEINASE | Bpl_scaf_31557 | 345033 | 365626 | + |
| CDS | |||||
| Bpl_scaf_31557-3.5 | |||||
| Transcript |
| Bpl_scaf_31557-3.5 |
| Protein |
| Bpl_scaf_31557-3.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00045 | Hemopexin | Hemopexin | Repeat | Interproscan |
| PF00413 | Peptidase_M10 | Matrixin | Domain | Interproscan |
| PF01471 | PG_binding_1 | Putative peptidoglycan binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000585 | Domain | Hemopexin-like domain | Interproscan |
| IPR001818 | Domain | Peptidase M10, metallopeptidase | Interproscan |
| IPR002477 | Domain | Peptidoglycan binding-like | Interproscan |
| IPR006026 | Domain | Peptidase, metallopeptidase | Interproscan |
| IPR018487 | Repeat | Hemopexin-like repeats | Interproscan |
| IPR021190 | Family | Peptidase M10A | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR033739 | Domain | Peptidase M10A, catalytic domain | Interproscan |
| IPR036365 | Homologous_superfamily | PGBD-like superfamily | Interproscan |
| IPR036375 | Homologous_superfamily | Hemopexin-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10201 | MATRIX METALLOPROTEINASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0030198 | Biological Process | extracellular matrix organization | Interproscan |
| GO:0030574 | Biological Process | collagen catabolic process | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07763 | MMP14; matrix metalloproteinase-14 (membrane-inserted) | EC:3.4.24.80 | TNF signaling pathway | ko04668 | PMID: 28812709 |
| GnRH signaling pathway | ko04912 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_31557-3.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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