| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_31349-0.3 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 | Bpl_scaf_31349 | 69156 | 69497 | + |
| CDS | |||||
| Bpl_scaf_31349-0.3 | |||||
| Transcript |
| Bpl_scaf_31349-0.3 |
| Protein |
| Bpl_scaf_31349-0.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13532 | 2OG-FeII_Oxy_2 | 2OG-Fe(II) oxygenase superfamily | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005123 | Domain | Oxoglutarate/iron-dependent dioxygenase | Interproscan |
| IPR027450 | Domain | Alpha-ketoglutarate-dependent dioxygenase AlkB-like | Interproscan |
| IPR032852 | Family | DNA oxidative demethylase ALKBH2 | Interproscan |
| IPR037151 | Homologous_superfamily | Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31573 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006307 | Biological Process | DNA alkylation repair | Interproscan |
| GO:0008198 | Molecular Function | ferrous iron binding | Interproscan |
| GO:0035511 | Biological Process | obsolete oxidative DNA demethylation | Interproscan |
| GO:0043734 | Molecular Function | obsolete DNA-N1-methyladenine dioxygenase activity | Interproscan |
| GO:0051747 | Molecular Function | cytosine C-5 DNA demethylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10859 | ALKBH2; DNA oxidative demethylase | EC:1.14.11.33 | DNA repair and recombination proteins | ko03400 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_31349-0.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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