Gene detail

Detailed information of Bpl_scaf_30366-9.22 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_30366-9.22	NADH-UBIQUINONE OXIDOREDUCTASE	Bpl_scaf_30366	909429	949475	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_30366-9.22

ATGCCAGTATACATAAGAAAAAATGTTAATTTTACTCCACCATCACTTGACAAAATCCCTTTGGAAGACGAGGATGATTACATTACTGACCCAGATCAGCTAAAAGACCCGCTTCCACAACCTTATCGAATGATTGATAAAGTTTTAATGCAAATGGTTGAAGATACATGGGAAATAATAGAAACAAGGGAGAACGCTAGAATTGAGGAAAGCAGAAAAATAAGACCACCACAATATGAATATTCAAAGAATTTAGAGTATTTACGTAAATGTGGATGTATGACAGATAGTGGTGATGGATTGTACATGTTCATTGGTCATACAAGAGGTATTGTTGTGATTGATGCCAATACTCAGGAGAGAGTTACAGCATGGGAAGAAGATAGAGTTGATTTACAGCATATAAAGGCACACATAATGGCACCAAATATTTATTTAGTAGTTACAATAGATGATATGGGTTTTTGTAGACTTCATGCCTTTTCTGGAGACAAACTGTATCTTCTGAGACATTTGAATGAACATCAGGAAGGAACAGACAAGATGATTATCAGTAAATGCATTGCATCAAAGGAAGGCGATTTTCTTGGTGCTGTTTTTGAGAACCCAGAAACCAGAGACATATGGTTGGAGATACACAAATTACCTAGAGAAAACTGGGTTACAGAACTGGAAAACATCAAAGCTAAGCTTCAGAAAAAAGAAGAACCACCAAAGGAGATAAAAGAAATAAAAGAAGAACCAAGTTCAGAAGTAGCAGATACAGAAGGTACTGAGGGAGAGAAAACAGAGACACAAACTCAACCGACTCCGAGCTACGAGGACACATCAGGGGTTAAATTTACGCATACAACATTAGTAATGAAGCTGAAGCCACCACCACAAGTTACAGCACTGGAATCAAGAGGTAATTTGGCATCTTCAATTTATGCTTCCTGTCAAAAGATTGACTCAGGGGAGGTAATTGGTACAGGGCAAAACCATGTTTTATCAACCACACAAATTGATCTAAGGAAAGAAGTATTTGACCATCTTCATGAAAATCTTGCTGAGTATGTCCAGAAAGAGCATCAGATAGATGTTGTCCAGGATGTACATTTTCATTTCTTGAATGCTGGAAAGATGATACCTCTTGGGTTAGAATCACCAGCAAATTTAAATATACCAACAACTGTAGCTGTTTGGTGGAATAACAGTACACATATATTTCATTACTCTTTACTGAAACAACCAGCTAAAGATGAGAACAAACCTGATATGGTATGGCCTTATACAGCTGAGATATCTGCCTCAGCAGTGTCAGAGGACACATCATTACTGATAGTAGGATTTGTAGATGGTAATATTGTAATGTGGGACAGATATTTAGGTATACAAAGAGGTGTAGTCAGTATATCAGATGTGGCCAGTATAGAGAAGCTACATTTCCTGGATCCATGTATCTGTCCACAGGAGATGACAGAATATCCACCATACAGAACACGAACTACATCGTACGTCCTAGTACAGTGTAAAAATGGAGCAATATATGCCGTGATAATAGGATCTGGTGGTGTACAGGCTGAACCAATTTGTCTTACTCCACCAATAGAGAACAGAGGAGACATGTTTTCAAAGGTTGAGATTATAAAAGGTTTACCAGATCTGATGTTGACTGTATTAGAAAGTGGAAATGTGCAAATTAGAGATATAATGCAGGGAAAAATACTATGTGAAATGAAAGTTCCAGAAACACATGAAATAATGTCTCCCTGGGACCCTGTGGTTGCCATTGGTAACAAGGGACAAATATTATATCTCAGAGCAATTGAAAAAGATCTACCAAAAGCTGAGGAAGTTACTATAACAACAGAGTCTGGTACAACAAAAGAGTCGGGTACAACTGACGGAACTGTATTTGTGTATCCATTATATACCTTTAATACATTAGAGTCCTACTTCAACAGGAAGAGGGAACCAGTACCGTTATCTGTACATAGTACAGTAGATAAACGAGTGGATGCTTTAATGAGAGAAAGGATAGCAATGCAGCCTCTAAGAAAAGACAGAATGCAAGAAAGATGGAATTGCTTCAAGGAAGAGATTTGGTCTATTTTACAATATAAAGAACAGGCTTTAAAGAAGTCAGAGGAGAGAGATGTCTATACTCCTGGGTCACTAGGATGGACCCCATTGCTGAGTTAA

Transcript

Bpl_scaf_30366-9.22

CGGTAGTCATCATTTAAACGTGACTAGTGTCTCCAAGTTATTCTTCCGAACAACATTTGTTGTTATTTCCGGTATTATGGCTGACTTGGAAACAGAAGCACTTGCACCTAAAGATTAATTTCTAACCCCCTTTTCAATGAAAAACATATCAGTCACAATTATTCATTTGTTTTATTTATCACATTAATTTACGTAAATACAGTCATAGCTTAAAAATGCCAGTATACATAAGAAAAAATGTTAATTTTACTCCACCATCACTTGACAAAATCCCTTTGGAAGACGAGGATGATTACATTACTGACCCAGATCAGCTAAAAGACCCGCTTCCACAACCTTATCGAATGATTGATAAAGTTTTAATGCAAATGGTTGAAGATACATGGGAAATAATAGAAACAAGGGAGAACGCTAGAATTGAGGAAAGCAGAAAAATAAGACCACCACAATATGAATATTCAAAGAATTTAGAGTATTTACGTAAATGTGGATGTATGACAGATAGTGGTGATGGATTGTACATGTTCATTGGTCATACAAGAGGTATTGTTGTGATTGATGCCAATACTCAGGAGAGAGTTACAGCATGGGAAGAAGATAGAGTTGATTTACAGCATATAAAGGCACACATAATGGCACCAAATATTTATTTAGTAGTTACAATAGATGATATGGGTTTTTGTAGACTTCATGCCTTTTCTGGAGACAAACTGTATCTTCTGAGACATTTGAATGAACATCAGGAAGGAACAGACAAGATGATTATCAGTAAATGCATTGCATCAAAGGAAGGCGATTTTCTTGGTGCTGTTTTTGAGAACCCAGAAACCAGAGACATATGGTTGGAGATACACAAATTACCTAGAGAAAACTGGGTTACAGAACTGGAAAACATCAAAGCTAAGCTTCAGAAAAAAGAAGAACCACCAAAGGAGATAAAAGAAATAAAAGAAGAACCAAGTTCAGAAGTAGCAGATACAGAAGGTACTGAGGGAGAGAAAACAGAGACACAAACTCAACCGACTCCGAGCTACGAGGACACATCAGGGGTTAAATTTACGCATACAACATTAGTAATGAAGCTGAAGCCACCACCACAAGTTACAGCACTGGAATCAAGAGGTAATTTGGCATCTTCAATTTATGCTTCCTGTCAAAAGATTGACTCAGGGGAGGTAATTGGTACAGGGCAAAACCATGTTTTATCAACCACACAAATTGATCTAAGGAAAGAAGTATTTGACCATCTTCATGAAAATCTTGCTGAGTATGTCCAGAAAGAGCATCAGATAGATGTTGTCCAGGATGTACATTTTCATTTCTTGAATGCTGGAAAGATGATACCTCTTGGGTTAGAATCACCAGCAAATTTAAATATACCAACAACTGTAGCTGTTTGGTGGAATAACAGTACACATATATTTCATTACTCTTTACTGAAACAACCAGCTAAAGATGAGAACAAACCTGATATGGTATGGCCTTATACAGCTGAGATATCTGCCTCAGCAGTGTCAGAGGACACATCATTACTGATAGTAGGATTTGTAGATGGTAATATTGTAATGTGGGACAGATATTTAGGTATACAAAGAGGTGTAGTCAGTATATCAGATGTGGCCAGTATAGAGAAGCTACATTTCCTGGATCCATGTATCTGTCCACAGGAGATGACAGAATATCCACCATACAGAACACGAACTACATCGTACGTCCTAGTACAGTGTAAAAATGGAGCAATATATGCCGTGATAATAGGATCTGGTGGTGTACAGGCTGAACCAATTTGTCTTACTCCACCAATAGAGAACAGAGGAGACATGTTTTCAAAGGTTGAGATTATAAAAGGTTTACCAGATCTGATGTTGACTGTATTAGAAAGTGGAAATGTGCAAATTAGAGATATAATGCAGGGAAAAATACTATGTGAAATGAAAGTTCCAGAAACACATGAAATAATGTCTCCCTGGGACCCTGTGGTTGCCATTGGTAACAAGGGACAAATATTATATCTCAGAGCAATTGAAAAAGATCTACCAAAAGCTGAGGAAGTTACTATAACAACAGAGTCTGGTACAACAAAAGAGTCGGGTACAACTGACGGAACTGTATTTGTGTATCCATTATATACCTTTAATACATTAGAGTCCTACTTCAACAGGAAGAGGGAACCAGTACCGTTATCTGTACATAGTACAGTAGATAAACGAGTGGATGCTTTAATGAGAGAAAGGATAGCAATGCAGCCTCTAAGAAAAGACAGAATGCAAGAAAGATGGAATTGCTTCAAGGAAGAGATTTGGTCTATTTTACAATATAAAGAACAGGCTTTAAAGAAGTCAGAGGAGAGAGATGTCTATACTCCTGGGTCACTAGGATGGACCCCATTGCTGAGTTAAAGAAACAGTTGTCTGAGTTTATAAACATTCCGTCCACTTAATTGTTTTTACAAACATTGATGAATAATTTCTAAATAAATTATTGTTTTTTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21030	WDR93	WD repeat-containing protein 93	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006885	Family	NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-like	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR049547	Repeat	WD repeat-containing protein 93 beta propeller	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005747	Cellular Component	obsolete mitochondrial respiratory chain complex I	Interproscan
GO:0022900	Biological Process	electron transport chain	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_30366-9.22 global RNA-seq network