| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_30173-4.13 | UNCHARACTERIZED | Bpl_scaf_30173 | 388948 | 401007 | + |
| CDS | |||||
| Bpl_scaf_30173-4.13 | |||||
| Transcript |
| Bpl_scaf_30173-4.13 |
| Protein |
| Bpl_scaf_30173-4.13 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04078 | Rcd1 | Cell differentiation family, Rcd1-like | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007216 | Family | CCR4-NOT transcription complex subunit 9 | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12262 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0006402 | Biological Process | mRNA catabolic process | Interproscan |
| GO:0017148 | Biological Process | negative regulation of translation | Interproscan |
| GO:0030014 | Cellular Component | CCR4-NOT complex | Interproscan |
| GO:0030015 | Cellular Component | CCR4-NOT core complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12606 | RCD1, CNOT9, CAF40; CCR4-NOT transcription complex subunit 9 | - | RNA degradation | ko03018 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_30173-4.13 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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