Detailed information of Bpl_scaf_30056-0.4 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_30056-0.4PORPHOBILINOGEN DEAMINASEBpl_scaf_30056669120690+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01379Porphobil_deamPorphobilinogen deaminase, dipyromethane cofactor binding domainDomainInterproscan
PF03900Porphobil_deamCPorphobilinogen deaminase, C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000860FamilyPorphobilinogen deaminaseInterproscan
IPR022417DomainPorphobilinogen deaminase, N-terminalInterproscan
IPR022418DomainPorphobilinogen deaminase, C-terminalInterproscan
IPR022419Binding_sitePorphobilinogen deaminase, dipyrromethane cofactor binding siteInterproscan
IPR036803Homologous_superfamilyPorphobilinogen deaminase, C-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11557PORPHOBILINOGEN DEAMINASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004418Molecular Functionhydroxymethylbilane synthase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006783Biological Processheme biosynthetic processInterproscan
GO:0018160Biological Processpeptidyl-pyrromethane cofactor linkageInterproscan
GO:0033014Biological Processtetrapyrrole biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01749hemC, HMBS; hydroxymethylbilane synthaseEC:2.5.1.61
Porphyrin and chlorophyll metabolism ko00860PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_30056-0.4 global RNA-seq network
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