Gene detail

Detailed information of Bpl_scaf_28870-5.15 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_28870-5.15	HEAT SHOCK PROTEIN 70KDA	Bpl_scaf_28870	467483	497027	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_28870-5.15

ATGTTCCAGTCAGTACAGACAGTTCAGTTTATGAAAAACAGTTGTAAACTGTTGCAACGTCAACATTTGTCAACTCTCAGAAAGCAGGTTGCTAATAGTAACATATATGATCAGTTAAACTTCAATACCAGAAGATATGCATCTGACAAAGTTAAAGGCCATGTTATTGGAATTGACTTGGGCACTACAAATTCCTGTGTGGCAATTATGGAAGGAAAAACTGCCAAAGTGTTGGAAAATTCTGAAGGAGCTAGAACTACTCCATCTGTGGTAGCCTTCCTAAAAGATGGGGAAAGAATAACAGGAATGCCAGCTAAACGACAGGCTGTAACTAATGCTGAAAACACATTGTCAGCAACCAAGAGATTAATAGGAAGAAGATTTGATGATGCAGAGGTTCAGAAAGACATTAAAAACATTGCCTACAAGATTGTAAAAGCTTCAAATGGGGATGCCTGGTTGGAAGCTCAAGGAAAGATGTATTCACCAAGTCAAGTTGGAGCTTTTGTTCTTGTTAAAATGAAAGAGACTGCAGAAAGTTATGTTGGACAACCAGTTAAAAATGCAGTGGTTACTGTACCAGCTTACTTCAATGATTCACAAAGACAGGCAACTAAAGATGCAGGACAAATATCTGGTTTAAATGTATTACGTGTGATTAATGAACCAACAGCTGCTGCTCTGGCCTATGGAATGGATAAATCTGATGATAGACTAATTGCTGTGTATGATTTGGGAGGAGGTACATTTGATATATCCATATTAGAAATCCAGAAAGGTGTGTTTGAAGTACGATCCACAAATGGAGATACATTCCTTGGAGGAGAAGATTTTGATAATTACCTTGTGCAATTCCTAGTCAAAGAATTCAAAAAAGAACAAGGGATAGACATCACAAAAGATAACATGGCATTACAAAGATTAAGAGAAGCTGCTGAGAAAGCCAAGATTGAATTGTCATCTTCTTTACAGACGGAAATAAATTTGCCATACTTAACCATGGATGCCAGTGGACCAAAACACATGAATATGAAACTTTCTCGATCTCAGTTTGAATCGATAGTAAATGATCTGATAAAGAGAACAGTAGGACCGTGTCAGAAAGCTTTACAAGATGCTGATGTGAAGAAATCTGATGTCCAGGAGGTTTTACTGGTGGGTGGTATGACCAGAATGCCTAAGGTTCAATCAACAGTACAAGAACTGTTTGGTAAACAACCCAGTAAAGCTGTTAACCCAGATGAAGCTGTAGCTATTGGTGCAGCCATTCAGGGTGGTGTATTGGCTGGTGACGTCACTGATGTTTTGTTATTAGATGTAACACCATTATCACTTGGTATTGAAACATTAGGAGGCGTATTTACAAAACTGATTAACAGAAACACAACTATTCCAACTAAAAAATCACAAGTGTTTTCAACAGCTGCTGATGGTCAAACACAAGTGGAAATTAAAGTTCATCAAGGTGAAAGAGAGATGGCCTTGGACAACAAACTCCTTGGGCAATTCCAGCTGATTGGTATCCCTCCAGCCCCTCGTGGTATACCACAGATTGAGGTTACTTTTGATATTGATGCTAATGGTATTGTAAACGTATCAGCTAGAGACAAAGGAACAGGCAAAGAACAACAAATTGTAATTCAGTCTTCTGGTGGGTTGTCTAAGGATGAAATTGAAAATATGGTCAAAAATGCAGAAAAATATGCTGTTGAAGATCAGAAACGAAAGGAAGTTGTAGAAGCAGTCAACTCAGCAGAAAGTATTATACATGATACAGAATCAAAGATGACAGAATTTAAAGATCAATTACCTGCAGATGAATGTGATAAACTTAGAGAACATATATCTAAAGTGAAAGAAGTTTTAGGAAATAAAGAAAATGAAACTCCAGAAAATATTAAACAAGTCACCAATGATTTACAACAGTCTTCTCTTAAATTATTTGAAATGGCATATAAAAAGATGGCTGCAGAAAGAGAAGGTTCACAAAGTTCATCATCATCATCAGACTCGTCAGAATCAACAGACTCAACATCATCAGAAACAGATCAAGAGCAGAAAAAAGAAGATAAAAATTAA

Transcript

Bpl_scaf_28870-5.15

ATCCACCATCTGTGAATGTGACCTGAACATAACAGGAAACGGTGGTTTGCGCATGCCTGACTGAAACATCCCTTATATCACACGTGCGGCAAGGACAAGTTGAAGTTACCTAACATCTAGAAGAAACAATGTTCCAGTCAGTACAGACAGTTCAGTTTATGAAAAACAGTTGTAAACTGTTGCAACGTCAACATTTGTCAACTCTCAGAAAGCAGGTTGCTAATAGTAACATATATGATCAGTTAAACTTCAATACCAGAAGATATGCATCTGACAAAGTTAAAGGCCATGTTATTGGAATTGACTTGGGCACTACAAATTCCTGTGTGGCAATTATGGAAGGAAAAACTGCCAAAGTGTTGGAAAATTCTGAAGGAGCTAGAACTACTCCATCTGTGGTAGCCTTCCTAAAAGATGGGGAAAGAATAACAGGAATGCCAGCTAAACGACAGGCTGTAACTAATGCTGAAAACACATTGTCAGCAACCAAGAGATTAATAGGAAGAAGATTTGATGATGCAGAGGTTCAGAAAGACATTAAAAACATTGCCTACAAGATTGTAAAAGCTTCAAATGGGGATGCCTGGTTGGAAGCTCAAGGAAAGATGTATTCACCAAGTCAAGTTGGAGCTTTTGTTCTTGTTAAAATGAAAGAGACTGCAGAAAGTTATGTTGGACAACCAGTTAAAAATGCAGTGGTTACTGTACCAGCTTACTTCAATGATTCACAAAGACAGGCAACTAAAGATGCAGGACAAATATCTGGTTTAAATGTATTACGTGTGATTAATGAACCAACAGCTGCTGCTCTGGCCTATGGAATGGATAAATCTGATGATAGACTAATTGCTGTGTATGATTTGGGAGGAGGTACATTTGATATATCCATATTAGAAATCCAGAAAGGTGTGTTTGAAGTACGATCCACAAATGGAGATACATTCCTTGGAGGAGAAGATTTTGATAATTACCTTGTGCAATTCCTAGTCAAAGAATTCAAAAAAGAACAAGGGATAGACATCACAAAAGATAACATGGCATTACAAAGATTAAGAGAAGCTGCTGAGAAAGCCAAGATTGAATTGTCATCTTCTTTACAGACGGAAATAAATTTGCCATACTTAACCATGGATGCCAGTGGACCAAAACACATGAATATGAAACTTTCTCGATCTCAGTTTGAATCGATAGTAAATGATCTGATAAAGAGAACAGTAGGACCGTGTCAGAAAGCTTTACAAGATGCTGATGTGAAGAAATCTGATGTCCAGGAGGTTTTACTGGTGGGTGGTATGACCAGAATGCCTAAGGTTCAATCAACAGTACAAGAACTGTTTGGTAAACAACCCAGTAAAGCTGTTAACCCAGATGAAGCTGTAGCTATTGGTGCAGCCATTCAGGGTGGTGTATTGGCTGGTGACGTCACTGATGTTTTGTTATTAGATGTAACACCATTATCACTTGGTATTGAAACATTAGGAGGCGTATTTACAAAACTGATTAACAGAAACACAACTATTCCAACTAAAAAATCACAAGTGTTTTCAACAGCTGCTGATGGTCAAACACAAGTGGAAATTAAAGTTCATCAAGGTGAAAGAGAGATGGCCTTGGACAACAAACTCCTTGGGCAATTCCAGCTGATTGGTATCCCTCCAGCCCCTCGTGGTATACCACAGATTGAGGTTACTTTTGATATTGATGCTAATGGTATTGTAAACGTATCAGCTAGAGACAAAGGAACAGGCAAAGAACAACAAATTGTAATTCAGTCTTCTGGTGGGTTGTCTAAGGATGAAATTGAAAATATGGTCAAAAATGCAGAAAAATATGCTGTTGAAGATCAGAAACGAAAGGAAGTTGTAGAAGCAGTCAACTCAGCAGAAAGTATTATACATGATACAGAATCAAAGATGACAGAATTTAAAGATCAATTACCTGCAGATGAATGTGATAAACTTAGAGAACATATATCTAAAGTGAAAGAAGTTTTAGGAAATAAAGAAAATGAAACTCCAGAAAATATTAAACAAGTCACCAATGATTTACAACAGTCTTCTCTTAAATTATTTGAAATGGCATATAAAAAGATGGCTGCAGAAAGAGAAGGTTCACAAAGTTCATCATCATCATCAGACTCGTCAGAATCAACAGACTCAACATCATCAGAAACAGATCAAGAGCAGAAAAAAGAAGATAAAAATTAATTATTGTGATAGATAAAAACATTTAATAAATTGTGTGAAGATAATCTGCCAAACCTTTTCTGGGAAACAATGCACTATTGACATAGTTGGTCATTAGATGTTTTACTAAGTAAATATACAGATAGAGTTCTCAAGTATAACACACGTCAGACATTTACGAGAGAGTGAAGAAAAATTAAGTTTAAAAAAAGTAAAATACTTTAGTGAGCAAATGGGTAAATTCATTTTGTACTGAAGGGTTGCAACTGTATTTTTGTTTTTGAAGAAGATCCAAGTTTGCAATTATGGAATAAATCAAAAGTTGCATTGTTATTCATTCAAGGTTTATATGAAAGTATGCTGGTGCTATGTGTGTTGAGTTCTCTCATGTCTGGTACAGAGAACACAGGTATATGTAGTAAGAATTGTTTTATCAGTCTCATTTAGGTCTGCTGCGAAAATGTTCACAATATCACAGAAAAAAATATATAAAATACATATATTGTTAAGAAATCCCAATTTTCTAAACAATTATGAAATTCAAGAATTCTAGGTTGCTCTCAATTCTTGCGTGTAGTTGTTTAATGATTATCGAATATGGGAAGTTGACTATGATTAACAGAACAATGCAGTAATTCAAGAATGGAGTGTTAGCACATTAGTGCATTATCATCGTTGTTTGGTTATGAGTGATGCATGTTTGATATTTGGTATGTAAGAGTAGATATTACCTAGATTTGTCTTTTTTGTTTTGTGCCAACAAGACGTTTCAAAAAGGAACTTGTTTTAATAATATTATCGAAAGCGACAATGTTTGATACTGTGACATCACCCCACAGTGAAATAAATGTTTTATTTAACTGCATAAAATAATGGTATTTCTTTCACTTTTTGTCGGTTGTACTTTTATTACAAAATTCTGCTGATGAATTGTTTTATTTTATATTTATGTGGATAGTAAGTAGTAGTCTTTGATCAGAAAACTTAATTATTGGAGAAAAGACACAAGCTGATGTTTTATGGACCATAATAATTTTGTAACCATAGTACCTGTATTTATTATTGTGTGAAAGTGATATTTATGAACAATGAGTTATATTTTTTGTTCTTGTAGGAACAAATATTATTACTGTGTCATTAATGCTTTATAAATTTGTCTTTTATTTTTTTTTAAATACTACATCATGAGTATACATGTTCTTTCTTCTACATTTATTGCAATGATTTCAGGATCATGTCGTGTAGATTCAAATTTTTATTCTACTCATTCTTATAATTACCTCGATTGACGTTAATTATGTAAACTAATAAAAACCAACAATTTGTCTATGATTGCCTTTTTCAGTTACTTTAGCTTTAAACAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012	HSP70	Hsp70 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012725	Family	Chaperone DnaK	Interproscan
IPR013126	Family	Heat shock protein 70 family	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR029047	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR029048	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04043	dnaK; molecular chaperone DnaK	-	RNA degradation	ko03018	PMID: 28812709
			Longevity regulating pathway - worm	ko04212	PMID: 28812709
			Tuberculosis	ko05152	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_28870-5.15 global RNA-seq network