Gene detail

Detailed information of Bpl_scaf_28734-1.49 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_28734-1.49	TYROSINE-PROTEIN KINASE	Bpl_scaf_28734	171175	188581	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_28734-1.49

ATGATGGGGCGTATTTCGACCGAAGCAGGTCTTTCCAAGAGATACACAAATCATTGTATAAAAGCAACAGTTGCTACCGGTTTGAAACGTAAAGGGATTGACCTGCTCTCAATTATGGCTGTCACAGGACATCACAACATTAAGTCACTTGACAGCTATATTGAGGGACCGTCTGATAGTGATCGTCGTAAACTATCATCAGCTTTACAAACTCTTGGACATGAAGATTCGTCCCCTATCAGCAATGGTACAACACCACTTACCTCTGCATCCGTGACAACAGTTTCGTCCAACATTATTAACAATTCTGACACAACATATATGATTGAAGACAGAAAAATATCTTCACAAACTGTGAATGTTGCTGCCATGCTGCCCAGGAACCCGTTGTCCGATAATCACATGAACATTTTCCAGGGTGCCAATATTTCTGGTGGAAATATCACGATCAACTTTCTTCAGAAGGACTTTGTCAGCGGTGAAGAACCAGTCTTAGAGGAACAAGAGTGGTTTCATGGAGTTCTACCTCGTGAAGAAGTTCAGCGACTCCTCAACAAAGATGGTGACTTCCTTGTGAGGGAGAGTAAGAACAAAAAGACAAATGAAGTTCAGCATGTTCTCTCAGCTTTTTGGGCAGGACATAAACATTTTATTATACAGTACGGAGAGGGAGGATGGAGATTTGAGGGGGAGTGTTTCCCCACGATACCAGAACTGGTAACCAGTCAATACAAGAGCGGGAATGTGGTGACAGCTAAATCACAGTGTATACTCAGTACCCCTATCATCAGAGAACATTGGCAATTAAAGAATGATGACATAGCTTTAGAAATGAAAATAGGAAATGGTAACTTTGGGGAAGTATATCGAGGAATCTACAAACCAACGAAGAAGACGGTGGCCATTAAAACATGCCGTGATACTTTATCTGATGACCAACGAAAGAAATTTTTGCAAGAAGGAAGAATTCTTAGACAGTACGACCACCCTAACATTGTAGAATTTATTGGTATTGCTGCTCAGCGACAGCCTGTTATGATTGTGATGGAATATGTGGCAGGTGGAGCTTTATTGAACTTTTTACGGAAACAGGGGAAAAACCAGACAAAAAAACAGTTAACTAAAATGTGTGAGGACGCAGCCAATGGGATGGACTATTTAGAAAATAAAAATTGTATACACAGGGATTTAGCGGCCCGTAATTGTTTAGTTGGTGACAACAATGTTGTTAAGATATCAGATTTCGGTATGTCGAGGGAAGAGGAAGAATACACAGTGTCTGACGGAAAATATACTTCTCTATGTGATGTTTGGAGTTTTGGCATTTTAATGTGGGAGATATTTTCAAATGGCCTTACACCCTACCAAGGGATGTCTAATGCTCAAGCCAGGGAGAGGGTTGATGCAGGTTACAGGATGCCAGCTCCTGAAGGAACCCCAGATGACATTTATCAACTTATGTTAAAAATATGGGAATATAATCCTTCAAAAAGACTTCATTTTGCTGCAATTAAAAAGGAACTGAAGTCAATCTATGCCAAATTGTAGCATCATATTCTGCTTATTTGTGATATTGCTATTATCTGAAAAGAAGTGTCTCTTCAATGGATGTTCATATGATGCAAGAGTTGTGTCCCTTTGTTTAAGGGTAGCGAAAACACATGGTCAGAATAATAATGAAGTTATGTAATTTAGATTCAAGAAATCAGCCATAATTCGTTTTTTTTTAAATTATTTTTATAATTAGTTGCTTTTTACATGTCATGTTTGTTGTTAACAAAAAAAAGTGTTTGTAAATTTAAATGAAGCAACTGGCCCAACACACTTAGTTCTATTTTTATAGTGCTAGCCTACCTATAAAATATTAAGATAAGATAAGACTTTTGTTTTTGAATTATCGGCCCATATTTGCATAACAATCAAACATTAGATAAAGTTAATAATGCAATAAACAATAATCAATAATAGTAAAGAAAATATAAGGCAGTACACAGTATTGAAAATGATTCTGATTCAGTTATACTGTTACTGGGCTTGGCCCAAATTCCATCCACTGTACAATGGGAGATAACTCTGTTTGTACAGTGTTGGAATTCTTACCGAGCTATGCAATCAGTGCAATCAACGAGGTGTTGTTATATCTTCCACGCGGCAACTACAAAACAACCGAGAAAAAAAAGGGAGCAAGGGCAGAGATCTAAATATAATTAGATTGACTTCTATGTAACTAAGAATATATATTTCATGTACTGTAAACCAACTTTTGTTCGCGTGCTATAAACCTTGGCGACTTTCGCGGGAGTGTACAAAATCATGAATGTTTATATCCGCGAACAAGTCGGTCTAAAGTGTGTAAGAAACAAGAGCATTTTGGTCATCGGGGAAATTAAATCTCCGCGAAACTGTCTTGAAGCAGAAAAACGCAAAACATAATAGCCGCGAAAATAAATTGGTTTACAGTATTAATTTTAAGAGGCATTGATCCGTTTAATGTCAACAGAACAAAACTTGGTTGTATTAATAATTAGCTGTATATTATTTCTTATTGTAATGTTTAGTTATATTTCAAAAACAGTGAATATAGCCCATGTAGCCTGTGAATGTTATTCAGCTGTATATTAAGCTTGTATCGCCACATATACAGTCAAACTCTACAGTAACAACCACTTCAGTATTAAATATATACCTGCTTATAGTGGCCACATAAATAGACTTGTGTATATGTAACATTAGTTATATGCTTGAAGCATGTTCATTTTCCCAGTACTCCTCAACTGAATTATGGAGCAGCCATGGTCATGATCATATGGTAGTTGGATTTACAATTACCTGTGCAATCAGTGCCTATTAGTGCAAAAGTTATGATTTTGAATCCCTTTTATATGGCGAGGTGTACTCAATACAACATTATTTGATAAAGTTTGTCAGGGACTTGCGACAAGTCAATGGTTTTCTCCAGGTACTCCAGATTCCTCCATCCATAAAACTGATTGCCACGAAATAATTGCAATATTGTTGAAGGTAGCGTTCAACACCATAAACCAACCAACCAAAACTAGATGACAGTTAAATATTCATGGCAGTAATTAGATTGACGCATATTATTTGCTCGTCAAGTTCGATTTTCCTGTACTCGTAGTTTAGATAACAGTTAGATAATTATGACAGTTATTTGACAAATTGATATTGGCTCATCGTGTTCATTTTTCTCCTACTCATACAGAGATGTACAAAAAGTATTTGGTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR035849	Domain	Fes/Fps/Fer, SH2 domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR050198	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08889	FER, TYK3; tyrosine-protein kinase Fer	EC:2.7.10.2	Adherens junction	ko04520	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_28734-1.49 global RNA-seq network