| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_28712-0.5 | 3-HYDROXYACYL-COA DEHYROGENASE | Bpl_scaf_28712 | 22906 | 67216 | + |
| CDS | |||||
| Bpl_scaf_28712-0.5 | |||||
| Transcript |
| Bpl_scaf_28712-0.5 |
| Protein |
| Bpl_scaf_28712-0.5 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00378 | ECH_1 | Enoyl-CoA hydratase/isomerase | Domain | Interproscan |
| PF00725 | 3HCDH | 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain | Domain | Interproscan |
| PF02737 | 3HCDH_N | 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001753 | Family | Enoyl-CoA hydratase/isomerase | Interproscan |
| IPR006108 | Domain | 3-hydroxyacyl-CoA dehydrogenase, C-terminal | Interproscan |
| IPR006176 | Domain | 3-hydroxyacyl-CoA dehydrogenase, NAD binding | Interproscan |
| IPR008927 | Homologous_superfamily | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Interproscan |
| IPR018376 | Conserved_site | Enoyl-CoA hydratase/isomerase, conserved site | Interproscan |
| IPR029045 | Homologous_superfamily | ClpP/crotonase-like domain superfamily | Interproscan |
| IPR036291 | Homologous_superfamily | NAD(P)-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23309 | 3-HYDROXYACYL-COA DEHYROGENASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0003857 | Molecular Function | 3-hydroxyacyl-CoA dehydrogenase activity | Interproscan |
| GO:0005777 | Cellular Component | peroxisome | Interproscan |
| GO:0006631 | Biological Process | fatty acid metabolic process | Interproscan |
| GO:0006635 | Biological Process | fatty acid beta-oxidation | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0016616 | Molecular Function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Interproscan |
| GO:0070403 | Molecular Function | NAD+ binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07514 | EHHADH; enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3,2-trans-enoyl-CoA isomerase | EC:4.2.1.17 EC:1.1.1.35 EC:5.3.3.8 | Carbon metabolism | ko01200 | PMID: 28812709 |
| Fatty acid metabolism | ko01212 | PMID: 28812709 | |||
| Propanoate metabolism | ko00640 | PMID: 28812709 | |||
| Butanoate metabolism | ko00650 | PMID: 28812709 | |||
| Fatty acid degradation | ko00071 | PMID: 28812709 | |||
| Valine, leucine and isoleucine degradation | ko00280 | PMID: 28812709 | |||
| Lysine degradation | ko00310 | PMID: 28812709 | |||
| Tryptophan metabolism | ko00380 | PMID: 28812709 | |||
| beta-Alanine metabolism | ko00410 | PMID: 28812709 | |||
| Aminobenzoate degradation | ko00627 | PMID: 28812709 | |||
| Caprolactam degradation | ko00930 | PMID: 28812709 | |||
| Peroxisome | ko04146 | PMID: 28812709 | |||
| PPAR signaling pathway | ko03320 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_28712-0.5 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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