Gene detail

Detailed information of Bpl_scaf_28677-1.19 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_28677-1.19	GLYCOGEN PHOSPHORYLASE	Bpl_scaf_28677	75594	98145	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_28677-1.19

Transcript

Bpl_scaf_28677-1.19

ATGGCTATACTGATGACAAATATTGTATTATATGTATTGGGTTTAGACATTGAAGAGCTGGAGGAAATAGAAGAAGATGCCGGTCTCGGCAATGGAGGACTTGGTCGGTTGGCAGCCTGTTTCCTTGATTCAATGGCAACACTTGGATTAGCAGCGTATGGTTATGGTTTGCGATATGATTATGGAATTTTTGCACAGAAAATAGTAAATGGTTGGCAGGTAGAGGAACCAGATGAATGGTTAAGATATGGTAATCCTTGGGAGAAAGCTAGACCAGAATATGTATTGCCTATCAATTTCTATGGTAGAGTAGAGGAATCTAATGGCAAGAAAAAATGGGTGGACACACAGGTTGTGTTTGCTATGCCATATGACAGTCCTATTCCTGGTTATGGTAACAACACTGTTAACACTATGAGATTATGGTCAGCCAAAGCTTCCAACAACTTTAATCTCAGTTTCTGTAAGTCTTCAGTTGCCATACAACTTAATGATACCCATCCATCTTTAGCTATCCCAGAACTAATGAGGATTTTAGTAGATATTGAAGGTATACCATGGGACAGAGCTTGGGATATAACTGTAAATACTTGTGCTTATACCAATCATACAGTATTACCTGAGGCTCTAGAGAGGTGGCCGGTACATTTACTAGAGAAACTGCTCCCTAGACATCTACAGATTATATTCTATATTAATCATATATTTATGCAGCAAGTAGCTCAAAAATGGCCAGGTGACTTTGACAGAATGAAGAGAATGTCTATGGTTGAAGAAGATGGTGAAAAAAGGGTCAACATGGCTTATATGGCTATTGTTGGATCTCATGCTATTAATGGAGTTGCTGCTATACATTCTAATATTATCAAAAATGAAACATTCAAGGATTTTGCGGAAATGTTTCCAGAGCGCTTCCAGAACAAAACCAACGGAATAACCCCAAGACGTTGGCTATTATTATGCAATCCAGGATTGGGTCCTTTACCAGGGTGTCATCTATCATCTATTGATGGGTACAGGACCAATAAAGTTATTAAAAAAAAAATTGGAGAAGAATGGATTACAAACCTGAAAGAGTTGGAAGGACTGAAGAAGTATGCTACAGATGAAACATTCCTTAGAACTATTATCAAAGTTAAACAGGAAAACAAGATGAAGTTAGCTGAGTATATCAAACAACAGTTTAACATCACAGTAAATACCTCTTCAATATTTGACATCCATGTGAAGAGAATTCACGAGTACAAACGTCAACTGTTAAACTGTTTCCACATGATCACCTTGTACAACAGACTTAAGAAGAATCCTAACATGGCATTCACTCCTAGGACCATCATGATTGGAGGAAAGGCTGCTCCTGGTTACCACATGGCAAAACTTATTATCAAACTGATAAACAACGTTGGGCGTACAATCAACAATGACCCCATCATTGGGGACCGTCTCAAGATAGTCTATCTAGAGAATTACCGTGTATCACTTGCTGAGAAGATTATTCCAGCTGCTGACCTCAGTGAACAAATATCTACTGCAGGAACTGAGGCATCTGGCACAGGCAACATGAAGTTCATGTTAAATGGTGCTTTGACAATTGGAACACTAGATGGTGCTAATGTAGAAATGTGTGAGGAAATGGGTAGAGAAAACATTTTCATCTTTGGAATGAATGTAGATGAAGTAGAAGAGACTAAAAGAACAGGTTATAACCCAAGAGATTACTATGAGAAGAATGCTGAGATAAGACAAGTAATTGACCAGATCAACAATGGTTACTTCTCTCCAGAAGATCAAAATATGTTTAAAGATATCTACAACAGTATTATGCATCAAGACAGGTTTATGCTATTGAAGGACTTTGAAGCCTACATCAAAGCTCAAGATCAAGTCAGTGAGGTTTTCAGGAAACCCTTGGAATGGGCTAAAATGTGTGCCTACAACATAGCTTCATCAGGAAAATTCTCAAGTGACCGCACAATTTCTGAATATGCCAAAGATATCTGGGGTGTTGAACCAAATGATATCAAACTTCCAGCACCACACGAGACACCAGAAGATTTTTCTCTTGATGTGAAAGCAGCCAAAAAATAAAAAAGCTACTTTTATAAACACTCAGATCTGATTTGATTTAACCTTACTGTCGTAACGAATCGGTCATAGCAAAAGGATGTCTGTTTTTTTGTGCAAGCTATTTTGGTATGCTTTTCATTTTTATACATTGTTTTGTGATGATAGACTGGTTTCTTTAAAAATTTATATTTGTAATAGTTGAATTTTATGATTTGTAGTGCAGGCATTGTTATAGTAACGGCAATATGTAATAGAGATGAGTTGTTCATTATATTATGTGGTGTTAATACTGTAACATCTTTAATTCTCTGTCATTATCTGAGACAGTGAACATTTATTTTATGGTTAGTCTATATGTAAATTTTCTTTTGATCTTAACAGAAGATAATATTTATTACCAAGCAACAAGTGTGATACCAACATATTATTGATATTGATGTGTAATAAATGGTACGTTATATTGACGTCATATTAACATCCCTGACGTTATGTTGACGTCACTGACGTCGTCTTGACAAATCTTCAGCAATATACTTGATAAGTTTTGTTCGAAATAAGACTTCTCGTCGTATTTCATGTCTCCAGCATTGTCTTTGAATCAATATTGCTGTGAGAAATCCATTCTAACAAAATTAATCAGTGATAGTACATACTTATCATGCACTCTGTTTATTGCTACAAGACCAGATTAAATATTGACTAGACTTGTTTTTTGGGGGGTTTTTTCTACTGTATTGTTGATCTAGACATTATAAAATTTTGAAATCCAGATTGTTTTCTTGTGTGTTTTTTTAAATTTTTTTTAACAATTTAATATAATTTACTGTAGTACATAACAATAACATTTGTTAGTCATGTTTATATAATAAAACCATAAGAGATATCACATTTCTACATCTAGATGATGAAAGACAATTTTACTTAAATGTAAAACAGATTACTAGAACAAAAGTAATGATATTATTATCAACAAAACTCCTGCATTGGTGGTATAAATAAAAAAAAAATTCAAGTATAATCTGATAACATTGATTTGATTTAATTATCCAAAATACCAAAACATTTTTTGTATGATGAAATAAAGTACATTTCATTGTTATTATTTTTTTGTTTTCAAAGAATTTTGCTATTTTTCATATGTTTTCTTATATGCATATTTCTTAAGTTTATTTTTTATAGTAAGAGTGTAAAACAATATATATATAATTTCTTATTATATCTACATTTCAGTATGTTTATTAGAAATGAAATAATTTAGAAAATATTTTACAGTTGTAATTATATAATTTGTTTTGTGTGTTTTTGAAAGAAAATTAGTTTTAATGAAATTCATATCGTGAAATGGCGTAACTTGTTCAGATTTTGTTTTTTCTCCACATATATTATATAATTTTTTTTTTTTAGCTTTTGCATAATAATAGTCCAATTAAACATACCACAGTGCTAATTCTGTTTTTTTTTACCCACCTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00343	Phosphorylase	Carbohydrate phosphorylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000811	Family	Glycosyl transferase, family 35	Interproscan
IPR011833	Family	Glycogen/starch/alpha-glucan phosphorylase	Interproscan
IPR035090	Conserved_site	Phosphorylase pyridoxal-phosphate attachment site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11468	GLYCOGEN PHOSPHORYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004645	Molecular Function	1,4-alpha-oligoglucan phosphorylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005980	Biological Process	glycogen catabolic process	Interproscan
GO:0008184	Molecular Function	glycogen phosphorylase activity	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00688	PYG, glgP; glycogen phosphorylase	EC:2.4.1.1	Starch and sucrose metabolism	ko00500	PMID: 28812709
			Necroptosis	ko04217	PMID: 28812709
			Biofilm formation - Escherichia coli	ko02026	PMID: 28812709
			Insulin signaling pathway	ko04910	PMID: 28812709
			Glucagon signaling pathway	ko04922	PMID: 28812709
			Insulin resistance	ko04931	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_28677-1.19 global RNA-seq network