Gene detail

Detailed information of Bpl_scaf_28438-0.4 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_28438-0.4	PEPTIDYLPROLYL ISOMERASE	Bpl_scaf_28438	10543	28979	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_28438-0.4

CTCGAGTGCGTTTATAACAAAGGAAATTCAATGGATGTTTCAAGATGATCAAGATGTTTAAATGTGAAAACACGTGAGAGACCCGAAATTTCTGGAAAAGAAAGCCGGGAACATTCACACAAATTTCTTCCTGAAACGTATTTCTCCTCATATTATACTTATGATGCCTGAAGGGAAAGCAACGGAAGAATTTCCAAAAGTTGACATTACACTAGAACAAGACGGGGGTGTTATTAAACAAATTTTGAGAGATGGCCAAGGAGAGGACAGACCTTGCACCGGCGACACTGTATCGGTTCATTATGTCGGCTGCCTTGATGATGGAACTGAATTTGATTCAAGTCGATCAAGGGAGCAACTGTTTACATTTGAACTTGGAAAAGAGGAGGTGATAAAAGCATGGGACATTGGTGTTGCTACTATGAAGAAAGGAGAACTTGCTCGTCTGATATGTAAACCAGAGTATGCCTATGGAGAGACTGGTTCCCTGCCCAAGATACCAGCTAATGCTACGTTAGAATTTGAAGTTGAATTGTTTGATTGGAAAGGAGAAGATGTTTCTGAAGCAAAAGATGGATCAGTTATCAGACGGATCATAAAGAATGGAGAAAAGTACAGAACTCCAAGTGAAGGAGCTACTGTAAAAGTGAAGTATACTGCATCATATGATGGTACAATATTTGAAAAAGAGAGAGAGGTTGAGTTCATTGTTGGTGAAGGAGACGAGCAAGGAATTATCCCGGGGTTAGAACAAGCAGTGTTGAAAATGAAACATTCTGAAAAGTCCCGTTTTGAGATTCAGGCATCTGAAGCTTATGGGACAGAGGGTAACACAGAGTTTAACATTCCTGGTGGTGCAAAACTATTGTATGAAGTAGAAATGCTGCGGTTTGAAAAGGCAAAAGAATCATGGGAGCTGTCACCTGAGGAAAAAATAGAACAGTCCGAAATCATGAAGAACAAAGGAACACATTATTTTAAGAAAGAAAATTACAAGAAAGCGATGCAATTTTATCAAAAAGTAAAAAAATATTTAGAATACGATACAGATCTGCAGGAGGAGGATAAAGAAAAAAGGAAGACTTTAAAGTTAGCTACGCATCTAAACATAGCAATGTGTCAAATCAAACTGGGAGATTACACAGAAGCTAGGGAGGAGTGTAATAAGGCTTTAGAACTGGATGTTGATAATGTTAAAGCTTACTTCAGGAGAGCAACGTGTTATTTTAGTGTCCATGATTATGAATTAGCTAAGGGTGATTATGAGAAAGTACTTCAATTTGAACCTGGTAATAAAGCTGCCAAGAACCATGTTGTTATATGTAACCAGAAGCTGAAGCAATTCAAAGAAAAAGAAAAACATATATACGCTGGAATGTTCAACAAATTTGCAGCACAAGATGCTCGTAATCCATATTCTGGCTATGAGGATGGGCTGGAAAGTATTGGGGAATGGCGTAATGAAATGGCTGACGGAATGATGACATTACAGCAGGAATGTGAAGCGTTTGGCGAGACAATGCCCGAACCAAAAACAAACAACCATGGACAGAAACATCAAACAGATGATTGAAAGTCAGACATCAAAGGAAAATGGTCCAAGTTCCAGAGGATTCAAAGAGCAGTGGTGACACGGATTCTAAATCCGAAGTGGAAACCCAGGAAGAACCTCAAAAGGAATCTGCCTAACAGACAATAGTATATATTACCAAGTGATGAAACATTTTAGTATTGTTTTGTAGCTTTGTACTTTGTCTGTTTTTTTTTACATAATCAAGTTATAAACTTTTTGCCATATTGTTTCTCAGAAGACATTTTTGTTGATGTTTAACTGTATATTGTTGAAATTTACAAATTAGAGTTAAGGGATCATTTATTTTTAGCAGCCTTAAGCCTTTTCTTTTGGCAGGCTTGAAGCCTTTTATTGTTGTTGTACATTTACTTTGTTAATAAGTTTTCTAAAATATTGTCATGGCAATGTAAAGATAAATACTTCAGAGTCTAGTTTGTCAAACTTTAATAAATGGAAGAAGTTATGGAATCATTCTGAATGGATTGTATGCATTTTTAACTACAGCAGACTTTATAGATTATTGTCTTTGGTGAAAGGAAGTGTTCAATAAAGAAGGTTGTAATTTGTTATAGAGTTAACTTATGTTAGTAATTTTAAGTTACATATACATTCAGTGCCTATCGCCACTAACGTTGTGAGTTCGAACCCCGTTCATGGCGAGGTGTACTCGATACAACATTATGTGATAAAGTTTTTCAGTGACTTCAGGTCAGTTGTTTTCTCCTGGTACTCTGGTTTCCTGCACCAATAAAACTGACTGTCACGATATAATTAAATTTTTGTTAAAAGTGACGTTAAACACCATAAACCTAAACCTAATTTTTAAGTTTTGATTTCTTTTGATGAATTTAATCCATTAGAATTATTTAACATGCCTTTACAGTAAATGTGTTATTTTGTAACGATTAAGAATAAAGGAAAATTAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00254	FKBP_C	FKBP-type peptidyl-prolyl cis-trans isomerase	Domain	Interproscan
PF07719	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001179	Domain	FKBP-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR013105	Repeat	Tetratricopeptide repeat 2	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR046357	Homologous_superfamily	Peptidyl-prolyl cis-trans isomerase domain superfamily	Interproscan
IPR050754	Family	Immunophilin FKBP-type domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46512	PEPTIDYLPROLYL ISOMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09571	FKBP4_5; FK506-binding protein 4/5	EC:5.2.1.8	Estrogen signaling pathway	ko04915	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_28438-0.4 global RNA-seq network