| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_28270-3.9 | E3 UBIQUITIN-PROTEIN LIGASE UBR7 | Bpl_scaf_28270 | 296865 | 316564 | + |
| CDS | |||||
| Bpl_scaf_28270-3.9 | |||||
| Transcript |
| Bpl_scaf_28270-3.9 |
| Protein |
| Bpl_scaf_28270-3.9 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Ubiquitin Family | E3|E3 activity|UBR-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02207 | zf-UBR | Putative zinc finger in N-recognin (UBR box) | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR003126 | Domain | Zinc finger, UBR-type | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR040204 | Family | E3 ubiquitin-protein ligase UBR7 | Interproscan |
| IPR047506 | Domain | E3 ubiquitin-protein ligase UBR7-like, UBR-box | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13513 | E3 UBIQUITIN-PROTEIN LIGASE UBR7 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11979 | UBR7; E3 ubiquitin-protein ligase UBR7 | EC:2.3.2.27 | Ubiquitin system | ko04121 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_28270-3.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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