Gene detail

Detailed information of Bpl_scaf_27770-0.10 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_27770-0.10	PHOSPHATIDYLINOSITOL GLYCAN, CLASS N	Bpl_scaf_27770	37606	75030	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_27770-0.10

ATGGATAATTCTTGTAGTCGGCGGAAACCAGACTCCAAAGGAGAAGATCGACTTGAAACATACAACGCAGCATCGTCAAGCAAAAACTCTTTTATAACAGTTGAAACAACATGTTTGATTCTCGCTGGATTGTTCACACACTTGGTATTTTTTTACTCGATATTTGACATCTATTTCACGTCACCCATCGTCCATGGAATGACTCCACATGTTTCCCCTCTGACAACTAGTGCTAAGCGTCTTGTTCTGTTTTCTGCGGATGGTTTGAGAGCTGATAAATTCTTTGAAGTGGATAATAATGGCAGGACAAGAGCTCCATATCTTAGAAGTATTATGGAAAGACGTGGTGCATGGGGTGTGTCGCACACACGTGTCCCCACAGAATCAAGACCAGGACATGTTGCACTTATAGCTGGCTTCTATGAAGATGTCAGTGCAGTAGCTAAAGGATGGAAAGAAAATCCAGTTGAGTTTGACTCAGTTTTTAACGAGAGTAGATACACATGGTCATGGGGGAGTCCTGATATTCTACCAATGTTTGCTAAAGGAGCTAGTGGTGATCATGTGTTTACTGAGATGTATACATCAGATGAGGAAGACTTTGCTGGATCACAACCTTCTAAACTGGATACCTGGGTGTTTGACAAGGTCAAGAATTTATTGGATGAAGCAAAAACAGACACCAAATTATTAGAAAAGTTGAAGAAAGAAAAGATAGTATTCTTCCTTCATTTATTGGGCATCGATACAAATGGACATGCCCATAATCCAGACTCACAAGAGTACTTACTTAATATAGAACTTGTGGACGCTGGAATCAAACAGATGGTCAAGTTATTTGATGAATTTTATGAACACGATGGGAAAACAGCATACATAATGTCTTCTGATCATGGCATGACTAACTGGGGATCTCATGGAGCAGGTAACCCCCACGAGACCCTCACTCCTTTAGTAGCATGGGGAGCAGGAATCAGAGGACCACTGAAAGCCAACAACCAACATGTCTACTCTGATACTTTCTCTAAAGAATGGAAGTTACAAAATTTACAGAGAACAGACGTTAACCAGGCAGATATAGCAGCATTGATGTCATCAGTGATAGGGGTTCCTTATCCCATGAATTCTGTTGGAACACTTCCACTTGATTATCTAAGCAGTTCAGACTGGGAGAAAGCAGAGAGTATATTTGCAAATGCTCGTCAGATATTGGATCAATATCAGGTAAAAATGAAACACAAAAGATCAACAACATTGTCAGTGACATTTAGACCTTTTAGTAAATTACTTCCAAGCATACAGATAGATAAGACGAGAAACATTAGAAATTTGATTAAAAGTGGACATTATGAATTAGCTATATCAGAATCACAGACATTGATCCAGCTTGCACTAGAAGGTTTGAACTACTATCATGGGTATGATAGATTTTTCCTAGGATTGAGTATTGTGTTTGGTTTTGTCGGCTGGATGATGTACACATTGACTATTGTTGTTCGTGATCACTCAGGAATGATCAAGGTCACAGTGAAGCTTGACAAGTTGTCAAAACCAATATGGCTGCAAGATAGAACCATAAAAATAGCATTTGCACTTATTGGATTTACTACCATTGTACTTTTAATAGTGCAGTCCTTGCCATTTACAAACTACCTGTATTGTTTAATACCAGTTGTTCTGTGGATGTTTGTTGTTCTCAGGGTAAATGTATTCCAGCAGTTATTTAAGAAGTTGAACCCTACCAGAAACATAAAGACACTATTGTTAGCTATTGTACCTCCTGTACTAGGATTAGAGATATTGGTGGCAGGTTTTTTCAGGAGAGAACTTTTATCAGTGGGTTTGATTATGATAGCAATATGGCCTATATTTACAACACAGAATGTAGGAAAAGATAAAGTAACACTTACTGGATGGATTGTTTCATGTTTAGTGCTATCATTGTTCCCTTTAGCACCTGTAGTAGGGAGACAAACTAACTATATATATGTGATTCTGAGCGGAATTATTGTTGTTTCAATAGGAACCTATTTAATTTTCTGGTTAAAGAAAGAACAGAATGTTGCAATATTCAGAGATCAACATTTCTATCTAGTAAACGTTATACAGGTTTTGATGATAGGTTTAGCCACATATAATGTATGGACTGTATCCAGTAGCATAGCAAAAAAAGAGGGTCTTCCATTGGTTAATCAGCTGATTAGTTGGGTTATATTAGGTATTAAATAT

Transcript

Bpl_scaf_27770-0.10

CTCACCGGCAAAACAATGCACGACTGATGGATAATTCTTGTAGTCGGCGGAAACCAGACTCCAAAGGAGAAGATCGACTTGAAACATACAACGCAGCATCGTCAAGCAAAAACTCTTTTATAACAGTTGAAACAACATGTTTGATTCTCGCTGGATTGTTCACACACTTGGTATTTTTTTACTCGATATTTGACATCTATTTCACGTCACCCATCGTCCATGGAATGACTCCACATGTTTCCCCTCTGACAACTAGTGCTAAGCGTCTTGTTCTGTTTTCTGCGGATGGTTTGAGAGCTGATAAATTCTTTGAAGTGGATAATAATGGCAGGACAAGAGCTCCATATCTTAGAAGTATTATGGAAAGACGTGGTGCATGGGGTGTGTCGCACACACGTGTCCCCACAGAATCAAGACCAGGACATGTTGCACTTATAGCTGGCTTCTATGAAGATGTCAGTGCAGTAGCTAAAGGATGGAAAGAAAATCCAGTTGAGTTTGACTCAGTTTTTAACGAGAGTAGATACACATGGTCATGGGGGAGTCCTGATATTCTACCAATGTTTGCTAAAGGAGCTAGTGGTGATCATGTGTTTACTGAGATGTATACATCAGATGAGGAAGACTTTGCTGGATCACAACCTTCTAAACTGGATACCTGGGTGTTTGACAAGGTCAAGAATTTATTGGATGAAGCAAAAACAGACACCAAATTATTAGAAAAGTTGAAGAAAGAAAAGATAGTATTCTTCCTTCATTTATTGGGCATCGATACAAATGGACATGCCCATAATCCAGACTCACAAGAGTACTTACTTAATATAGAACTTGTGGACGCTGGAATCAAACAGATGGTCAAGTTATTTGATGAATTTTATGAACACGATGGGAAAACAGCATACATAATGTCTTCTGATCATGGCATGACTAACTGGGGATCTCATGGAGCAGGTAACCCCCACGAGACCCTCACTCCTTTAGTAGCATGGGGAGCAGGAATCAGAGGACCACTGAAAGCCAACAACCAACATGTCTACTCTGATACTTTCTCTAAAGAATGGAAGTTACAAAATTTACAGAGAACAGACGTTAACCAGGCAGATATAGCAGCATTGATGTCATCAGTGATAGGGGTTCCTTATCCCATGAATTCTGTTGGAACACTTCCACTTGATTATCTAAGCAGTTCAGACTGGGAGAAAGCAGAGAGTATATTTGCAAATGCTCGTCAGATATTGGATCAATATCAGGTAAAAATGAAACACAAAAGATCAACAACATTGTCAGTGACATTTAGACCTTTTAGTAAATTACTTCCAAGCATACAGATAGATAAGACGAGAAACATTAGAAATTTGATTAAAAGTGGACATTATGAATTAGCTATATCAGAATCACAGACATTGATCCAGCTTGCACTAGAAGGTTTGAACTACTATCATGGGTATGATAGATTTTTCCTAGGATTGAGTATTGTGTTTGGTTTTGTCGGCTGGATGATGTACACATTGACTATTGTTGTTCGTGATCACTCAGGAATGATCAAGGTCACAGTGAAGCTTGACAAGTTGTCAAAACCAATATGGCTGCAAGATAGAACCATAAAAATAGCATTTGCACTTATTGGATTTACTACCATTGTACTTTTAATAGTGCAGTCCTTGCCATTTACAAACTACCTGTATTGTTTAATACCAGTTGTTCTGTGGATGTTTGTTGTTCTCAGGGTAAATGTATTCCAGCAGTTATTTAAGAAGTTGAACCCTACCAGAAACATAAAGACACTATTGTTAGCTATTGTACCTCCTGTACTAGGATTAGAGATATTGGTGGCAGGTTTTTTCAGGAGAGAACTTTTATCAGTGGGTTTGATTATGATAGCAATATGGCCTATATTTACAACACAGAATGTAGGAAAAGATAAAGTAACACTTACTGGATGGATTGTTTCATGTTTAGTGCTATCATTGTTCCCTTTAGCACCTGTAGTAGGGAGACAAACTAACTATATATATGTGATTCTGAGCGGAATTATTGTTGTTTCAATAGGAACCTATTTAATTTTCTGGTTAAAGAAAGAACAGAATGTTGCAATATTCAGAGATCAACATTTCTATCTAGTAAACGTTATACAGGTTTTGATGATAGGTTTAGCCACATATAATGTATGGACTGTATCCAGTAGCATAGCAAAAAAAGAGGGTCTTCCATTGGTTAATCAGCTGATTAGTTGGGTTATATTAGGTATTAAATAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01663	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase	Family	Interproscan
PF04987	PigN	Phosphatidylinositolglycan class N (PIG-N)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002591	Family	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	Interproscan
IPR007070	Family	GPI ethanolamine phosphate transferase 1	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR017852	Domain	GPI ethanolamine phosphate transferase 1, C-terminal	Interproscan
IPR037671	Domain	GPI ethanolamine phosphate transferase 1, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12250	PHOSPHATIDYLINOSITOL GLYCAN, CLASS N	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0006506	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0051377	Molecular Function	mannose-ethanolamine phosphotransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05285	PIGN; phosphatidylinositol glycan, class N	EC:2.7.-.-	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	ko00563	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_27770-0.10 global RNA-seq network