Detailed information of Bpl_scaf_27325-2.11 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_27325-2.11VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13BBpl_scaf_27325213249291209+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06650VPS13_VABVacuolar-sorting associated protein 13, adaptor binding domainDomainInterproscan
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan
PF16908VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan
PF16909VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR009543DomainVacuolar protein sorting-associated protein 13, VPS13 adaptor binding domainInterproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR031645DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR031646DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan
IPR039782FamilyIntermembrane lipid transfer protein VPS13BInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12517VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13BInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
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KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19526VPS13B; vacuolar protein sorting-associated protein 13B-Membrane traffickingko04131PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_27325-2.11 global RNA-seq network
TOP