Detailed information of Bpl_scaf_2732-0.5 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_2732-0.5DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Bpl_scaf_27321206284775-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00562RNA_pol_Rpb2_6RNA polymerase Rpb2, domain 6DomainInterproscan
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan
PF04561RNA_pol_Rpb2_2RNA polymerase Rpb2, domain 2DomainInterproscan
PF04563RNA_pol_Rpb2_1RNA polymerase beta subunitFamilyInterproscan
PF04565RNA_pol_Rpb2_3RNA polymerase Rpb2, domain 3DomainInterproscan
PF06883RNA_pol_Rpa2_4RNA polymerase I, Rpa2 specific domain DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007120DomainDNA-directed RNA polymerase, subunit 2, hybrid-binding domainInterproscan
IPR007121Conserved_siteRNA polymerase, beta subunit, conserved siteInterproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan
IPR007642DomainRNA polymerase Rpb2, domain 2Interproscan
IPR007644DomainRNA polymerase, beta subunit, protrusionInterproscan
IPR007645DomainRNA polymerase Rpb2, domain 3Interproscan
IPR009674DomainDNA-directed RNA polymerase I subunit RPA2, domain 4Interproscan
IPR014724Homologous_superfamilyRNA polymerase Rpb2, OB-foldInterproscan
IPR015712FamilyDNA-directed RNA polymerase, subunit 2Interproscan
IPR037033Homologous_superfamilyDNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyInterproscan
IPR037034Homologous_superfamilyRNA polymerase Rpb2, domain 2 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0032549Molecular Functionribonucleoside bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03002RPA2, POLR1B; DNA-directed RNA polymerase I subunit RPA2EC:2.7.7.6
Purine metabolism ko00230PMID: 28812709
Pyrimidine metabolism ko00240PMID: 28812709
RNA polymerase ko03020PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_2732-0.5 global RNA-seq network
TOP