| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_27297-0.6 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED | Bpl_scaf_27297 | 57433 | 83680 | - |
| CDS | |||||
| Bpl_scaf_27297-0.6 | |||||
| Transcript |
| Bpl_scaf_27297-0.6 |
| Protein |
| Bpl_scaf_27297-0.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00441 | Acyl-CoA_dh_1 | Acyl-CoA dehydrogenase, C-terminal domain | Domain | Interproscan |
| PF02770 | Acyl-CoA_dh_M | Acyl-CoA dehydrogenase, middle domain | Domain | Interproscan |
| PF02771 | Acyl-CoA_dh_N | Acyl-CoA dehydrogenase, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006089 | Conserved_site | Acyl-CoA dehydrogenase, conserved site | Interproscan |
| IPR006091 | Domain | Acyl-CoA oxidase/dehydrogenase, middle domain | Interproscan |
| IPR009075 | Domain | Acyl-CoA dehydrogenase/oxidase, C-terminal | Interproscan |
| IPR009100 | Homologous_superfamily | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily | Interproscan |
| IPR013786 | Domain | Acyl-CoA dehydrogenase/oxidase, N-terminal | Interproscan |
| IPR036250 | Homologous_superfamily | Acyl-CoA dehydrogenase-like, C-terminal | Interproscan |
| IPR037069 | Homologous_superfamily | Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily | Interproscan |
| IPR046373 | Homologous_superfamily | Acyl-CoA oxidase/dehydrogenase, middle domain superfamily | Interproscan |
| IPR050741 | Family | Acyl-CoA dehydrogenase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48083 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003995 | Molecular Function | acyl-CoA dehydrogenase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0016627 | Molecular Function | oxidoreductase activity, acting on the CH-CH group of donors | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| GO:0051793 | Biological Process | medium-chain fatty acid catabolic process | Interproscan |
| GO:0070991 | Molecular Function | medium-chain fatty acyl-CoA dehydrogenase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00249 | ACADM, acd; acyl-CoA dehydrogenase | EC:1.3.8.7 | Carbon metabolism | ko01200 | PMID: 28812709 |
| Fatty acid metabolism | ko01212 | PMID: 28812709 | |||
| Propanoate metabolism | ko00640 | PMID: 28812709 | |||
| Fatty acid degradation | ko00071 | PMID: 28812709 | |||
| Valine, leucine and isoleucine degradation | ko00280 | PMID: 28812709 | |||
| beta-Alanine metabolism | ko00410 | PMID: 28812709 | |||
| PPAR signaling pathway | ko03320 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_27297-0.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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