| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_27272-1.3 | D-GLUCURONYL C5-EPIMERASE | Bpl_scaf_27272 | 224964 | 245896 | + |
| CDS | |||||
| Bpl_scaf_27272-1.3 | |||||
| Transcript |
| Bpl_scaf_27272-1.3 |
| Protein |
| Bpl_scaf_27272-1.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06662 | C5-epim_C | D-glucuronyl C5-epimerase C-terminus | Repeat | Interproscan |
| PF21174 | Glce_b_sandwich | D-glucuronyl C5-epimerase, beta-sandwich domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008928 | Homologous_superfamily | Six-hairpin glycosidase superfamily | Interproscan |
| IPR010598 | Domain | D-glucuronyl C5-epimerase, C-terminal | Interproscan |
| IPR039721 | Family | D-glucuronyl C5-epimerase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13174 | D-GLUCURONYL C5-EPIMERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005794 | Cellular Component | Golgi apparatus | Interproscan |
| GO:0005975 | Biological Process | carbohydrate metabolic process | Interproscan |
| GO:0015012 | Biological Process | heparan sulfate proteoglycan biosynthetic process | Interproscan |
| GO:0047464 | Molecular Function | heparosan-N-sulfate-glucuronate 5-epimerase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K01793 | GLCE; heparosan-N-sulfate-glucuronate 5-epimerase | EC:5.1.3.17 | Glycosaminoglycan biosynthesis - heparan sulfate / heparin | ko00534 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_27272-1.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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