Detailed information of Bpl_scaf_27256-0.8 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_27256-0.8DNA-DIRECTED RNA POLYMERASE SUBUNIT KBpl_scaf_272561359318725+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01192RNA_pol_Rpb6RNA polymerase Rpb6 FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006110FamilyRNA polymerase, subunit omega/Rpo6/RPB6Interproscan
IPR006111FamilyArchaeal Rpo6/eukaryotic RPB6 RNA polymerase subunitInterproscan
IPR020708Conserved_siteDNA-directed RNA polymerase, 14-18kDa subunit, conserved siteInterproscan
IPR028363FamilyDNA-directed RNA polymerase, subunit RPB6Interproscan
IPR036161Homologous_superfamilyRPB6/omega subunit-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47227DNA-DIRECTED RNA POLYMERASE SUBUNIT KInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0001055Molecular FunctionRNA polymerase II activityInterproscan
GO:0001056Molecular FunctionRNA polymerase III activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005665Cellular ComponentRNA polymerase II, core complexInterproscan
GO:0005666Cellular ComponentRNA polymerase III complexInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0042797Biological ProcesstRNA transcription by RNA polymerase IIIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03014RPB6, POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2-Purine metabolism ko00230PMID: 28812709
Pyrimidine metabolism ko00240PMID: 28812709
RNA polymerase ko03020PMID: 28812709
Cytosolic DNA-sensing pathway ko04623PMID: 28812709
Huntington's disease ko05016PMID: 28812709
Epstein-Barr virus infection ko05169PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_27256-0.8 global RNA-seq network
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