| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_27157-0.4 | PCD6 INTERACTING PROTEIN-RELATED | Bpl_scaf_27157 | 11157 | 44513 | + |
| CDS | |||||
| Bpl_scaf_27157-0.4 | |||||
| Transcript |
| Bpl_scaf_27157-0.4 |
| Protein |
| Bpl_scaf_27157-0.4 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03097 | BRO1 | BRO1-like domain | Repeat | Interproscan |
| PF13949 | ALIX_LYPXL_bnd | ALIX V-shaped domain binding to HIV | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004328 | Domain | BRO1 domain | Interproscan |
| IPR025304 | Domain | ALIX V-shaped domain | Interproscan |
| IPR038499 | Homologous_superfamily | BRO1 domain superfamily | Interproscan |
| IPR045251 | Family | Vacuolar protein-sorting protein Bro1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23030 | PCD6 INTERACTING PROTEIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000281 | Biological Process | mitotic cytokinesis | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005768 | Cellular Component | endosome | Interproscan |
| GO:0071985 | Biological Process | multivesicular body sorting pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12200 | PDCD6IP, ALIX, RIM20; programmed cell death 6-interacting protein | - | Endocytosis | ko04144 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_27157-0.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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