Detailed information of Bpl_scaf_26945-0.2 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_26945-0.2HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66Bpl_scaf_269452385549481+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08640U3_assoc_6U3 small nucleolar RNA-associated protein 6FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013949FamilyU3 small nucleolar RNA-associated protein 6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR23271HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 66Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0030515Molecular FunctionsnoRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14557UTP6; U3 small nucleolar RNA-associated protein 6-Ribosome biogenesis in eukaryotes ko03008PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_26945-0.2 global RNA-seq network
TOP