Gene detail

Detailed information of Bpl_scaf_2668-1.11 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_2668-1.11	PHOSPHOLIPID ACYLTRANSFERASE	Bpl_scaf_2668	61870	102647	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_2668-1.11

AAAATCTAAACATAGTCCAGAGACGTTGATCTGATTACTGTTTAGATGAAAACAACACAATGAAGCGACAGATAACAATACCGCGTCAAAGATCTCTGATTTCACCCGAGATCTCAAATCCATTTGTTCATAAAATACATCTGAATTTTGTGCAGAAGTTGCAGGTTGTTTTCATGTCATTATTTGTTGTGCCAGTACGACTTCTACTGATCTTGTTGTGTCTGTTGGTGGCATGGATGTTAGCAAAGGCTTCATTGGCATTCCGATCAAAAGAAGATCATGCAAAACCTCTGAAAGGATGGCGAAGGTCATTTCACAAAGCTATAATGTATTCAGGACGTGCTATAGCATTCTTCAGTGGATTCCACAATATAAAAGTAATAGGCCAACCAGCAGAGGCTAGTGTAGCTCCAGTTATAGTCTGTGCACCACATTCAAGTTTCATGGATGTTTTTGTTATCTTTTATTGCTCGATGATTCCTAGTAGTGTCTCTAAGCAAGAAAATGCAGCTATGCCAATGCTTGGAACTCTCACAGAATTTACCCAGCCTTTATATGTAAAACGAGAAGATCCTAACTCCAGAAAAAATATAATGAAAGAGATGAAAAAGCGAGCCAAGACAATGGGTGAATGGCCTCCCATTATTATATTTCCTGAGGGAACATGTACAAATAGATCATGTTTAATAGGATTTAAACAAGGTGCTTTTTACCCAGGAGTGCCTATTCAACCTGTCTGTATACGATACAATAACAGTTTAGACACTGTCACATGGACCTGGGAAGGACCAGGAGCATTTACATGTTTGTGGCTAACTTTATGTCAGTTTCATAATAAAATGGAAATAGAGTTTTTACCTGTATATAAGCCAAGTGAAGAGGAAATTCAAGATCCACATTTGTACGCAGCTAATGTTAGAGATAAGATGTCAGAATGTTTACATATTCCTGTAACAGATCATACATATGATGATGTTCGTCTCATGCAGAGGGCAGCAAAGCTCAATATACCAAAAACTGCTGGACTAATAGAATTCCAAAAAATTAATACAAAACTTGGGATAAAATTTGACCAAGCAAATGAACTGTTGGACAAGTTTGGTGCTATGGGAGCCAAAGAGAAAGGTTGTATAACACTGGGAGAATTTGCTGCTTATTTACGTGTGCCAGTATCTCCTGCACTAGAGGAAATGTTTTCTATATATGATAGGAATGGCTCAGAAACAATGGATTTCAGAGAATATTTAATTGGTCTTTCATTAGTATCACAGCCAGTCAACAATGATGACACAATAAGATTAGCTTTTCAGTTATTTGATAATGGTGATAAAGGATATATTACACTTGAAGAATTATCAGAAATTTTACTGAATGCCTTTGGAATGGATGATATAGATGTCGAAAAATTATTTCATGAAGTAGATACAAATGAAGATGACAAAATTACTTTTGATGAATTCAGGATTTATGCAGAAGAAAAACCAGAGTATGCTAAGTTATTTATGACATACCAAGAACTGAAAACACAGAACACAAATGGTAATGGGCATAAACTGGATTAACTGACCTTAGACAGATGTCTCACGCTTAGTTACTGATCTTGAGTTTCTAAAATAATATCAGTGCATTAAGACATACTGATATACATTCTCAAGCAGGATATATGCATGATTTAAGAATTGTGTGTAGGTTAATTTGTTATGGTTAAATTAAGAAATAATCCATGGCAGCCATTGTGTTATATTCATTTAACTATGGGCTGGGCCTTTATAATCGAATTTAATCACGAGCAACAGCGAGGGGTTAAATTAACGATTATAAAGGCCCAGCCCATGGTTAAATGAATATAATACAATGGCTGCCATGGATTATTTCGATTCTAATAGGACAAATACGGTAATTTACATGCAAAACGCCGCCTATACACACAGCAATGTATTTGGCTGTTCCGTTACCCTCCCGAACACAAAGATATGATTTCTGTCATTTCTAGATACGATTTCTGTCATTTGAGATTACTAAATGTTGTCATTGATGAACATCAATTCAAAAGAAAGGGAAAATACTACAAATCCCACTTCGACAAGGAGGCGTACACGAAGCCAAAAAACGTCAGGATCTCTATGTTCTAAACTGGAAGTCTTCATATGACGTAATGTTGTTTACGTGCCAAAATTGTCAACAACATTTCGCGGAATTTTAATTTTCTACGGTAAATGTAGGTCAGTATAACGTACACCATTTCGTGGGAGGGTACACGGAATAGCCGAATTGACAACATTACCGCGTTTGCGCTAAAAGTGTTGTTGTTGAGTATTATATAAACTGACGATAACACGGCGTCATATTAGAATGGATGTTTTATATAAACACCATACAATTTTTTTCAGTATTTTTTATTTTAAAGTTTTTTTTTTATTTTATGTGATCACATATATGTTTAAACATATGTTTTTGTAATATCATTACATTGTATTTTGATTTGTACCTAAGATTATACTTCTATAATAGCACTGGTTAGACTTACACAAAATGTTATATGTTATTTACACACAAACACATATATTGTATACAAAGATTTCATCCTCCTATTTTCATAACGTGTGTATTTTCCAAACTTTATAACAGTGTATTCTCATGGAAGATTTAATGATTTCATATCCATTTCATGAAGAAAGAAATGTTTTATATTAAACAAAAGTTCTTTATACGAATGTTTCAATTTTGGCCATGTTTTACATACAGGTAAATAAAAAACAGGTTTTTAGTAAGGTGAAATGGCAGGTGGGTGAATAGATAATGTAAATCACAGTAATAAGATTATATACTTTGTGCACATAATTCATCCAATTTTATTCTCGATCTATAAAGCTTTGCTGGATGTTTGTTTGCATAATGGAGCTGCACAAAAGGGAGGGGACACCTACACATATTTGGAATAGTTGAAAAAACCAACACCCATTAAATTTTATATTCTTTGGAAAACATTACCTCTTTGGTAAGCAAGGAAACCATACATCATTTAAGATCACTTGTGACACTGTCGCACATAAAAAATTAATTGAACTGCCTTCTTCTATCCCAATTTAATTTTTTCCGGAATAATCCAAAGCACCGATACTTGTATACATCACAAAGATATACAATTGGCCTTCGATACGAATTTGACCAATTGTTCATAGCATTTTAAAAAAAGATTTCATTTATGAATTATAGCGGAAGAAAAAATAATAAGGCACATAAGAAAGGTCACACCAATTGAAGTGTCATTTTTATTTTTTCATAGGTGTTTCATCATTCAATGTCATGAAGCATGTGTACATTTTGGTTAAGTCATGTTAGAGTAATAATGTTTCCATGACATTTACGGGTTAATTTTTTCTACCTTGTAGTTAGTTCAGACAACCATGTAAGTTAAGAGGCACTTTAATTTTATGACAATTTGCACTCTATAACTGTTGTTTGACTCTGTTTTGTGTGAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01553	Acyltransferase	Acyltransferase	Family	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR002123	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR045252	Domain	Lysophosphatidylcholine acyltransferase LPCAT1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23063	PHOSPHOLIPID ACYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008374	Molecular Function	O-acyltransferase activity	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0042171	Molecular Function	lysophosphatidic acid acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13510	LPCAT1_2; lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase	EC:2.3.1.23 EC:2.3.1.67	Glycerophospholipid metabolism	ko00564	PMID: 28812709
K13510		EC:2.3.1.23 EC:2.3.1.67	Ether lipid metabolism	ko00565	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_2668-1.11 global RNA-seq network